RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 HOXA4Q00056 320 aaPredicted RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 UBE2V1Q13404 147 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 EDDM3AQ14507 147 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 SLC25A53Q5H9E4 307 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 OR4A47Q6IF82 309 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 PQLC2Q6ZP29 291 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 RPS19BP1Q86WX3 136 aaKnown RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 SLC24A4Q8NFF2 622 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 LOXL4Q96JB6 756 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 ZNF331Q9NQX6 463 aaPredicted RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 IL36BQ9NZH7 164 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 CHCHD2Q9Y6H1 151 aaPredicted RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 ROS1P08922 2347 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 NKX6-3A6NJ46 265 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 LRRC30A6NM36 301 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 IGLC2P0DOY2 106 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 IGLC3P0DOY3 106 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 CD27P26842 260 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 CRYBB3P26998 211 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 GFRA1P56159 465 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 TCTAP57738 103 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 SELENOTP62341 195 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 RBX1P62877 108 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 RPL30P62888 115 aaKnown RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 RAC1P63000 192 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 TIGITQ495A1 244 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 TMEM42Q69YG0 159 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 TMEM14EPQ6UXP3 125 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 ABHD12Q8N2K0 398 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 MRGPRDQ8TDS7 321 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 PCED1AQ9H1Q7 454 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 GAL3ST2Q9H3Q3 398 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 PSG11Q9UQ72 335 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 PRR14LQ5THK1 2151 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 GJE1A6NN92 205 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 M0R2Z0 102 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 CDIPTO14735 213 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 RAB29O14966 203 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 FCGR3BO75015 233 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 PIAS2O75928 621 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 OR10J4P0C629 311 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 CD99P14209 185 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 LIFP15018 202 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 RAC3P60763 192 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 HYAL1Q12794 435 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 CEACAM21Q3KPI0 293 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 ANKRD39Q53RE8 183 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 C1orf53Q5VUE5 145 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 SPATA31B1PQ5VZV4 182 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 OR4A16Q8NH70 328 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 FGF23Q9GZV9 251 aaPredicted RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 C12orf49Q9H741 205 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 KCNIP2Q9NS61 270 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 TECRQ9NZ01 308 aaKnown RBP5.61□□□□□ -1.51
LMO3-235ENST00000616247 NBEAQ8NFP9 2946 aa5.61□□□□□ -1.51
LMO3-235ENST00000616247 TMEM131Q92545 1883 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 C5orf67F2Z3F1 127 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 FKBP2P26885 142 aaKnown RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 GPR6P46095 362 aaPredicted RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 GNG3P63215 75 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 AESQ08117 197 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 PSG5Q15238 335 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 TMEM144Q7Z5S9 345 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 ZC2HC1AQ96GY0 325 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 HIPK2Q9H2X6 1198 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 ZNF391Q9UJN7 358 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 SLC45A2Q9UMX9 530 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 RPH3ALQ9UNE2 315 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 TIMM9Q9Y5J7 89 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 FRYLO94915 3013 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 MUC22E2RYF6 1773 aaPredicted RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 CEP250Q9BV73 2442 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 EML6Q6ZMW3 1958 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 IGHV1OR15-9A0A0B4J2B8 117 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 A0A0G2JMM0 328 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 A0A1W2PPB8 328 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 A0A1W2PRS3 328 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 HELTA6NFD8 242 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 EPOPA6NHQ4 379 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 KIR3DP1A8MWS1 328 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 SNAI2O43623 268 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 OR2H2O95918 312 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 CGAP01215 116 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 APOA2P02652 100 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 USF1P22415 310 aaPredicted RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 TNFSF4P23510 183 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 TSPOP30536 169 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 LINC00310P59036 64 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 DAZAP2Q15038 168 aaPredicted RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 ACSF3Q4G176 576 aaPredicted RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 CENPWQ5EE01 88 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 SMIM15Q7Z3B0 74 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 GALMQ96C23 342 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 MCRIP2Q9BUT9 160 aaKnown RBP5.6□□□□□ -1.51
LMO3-235ENST00000616247 CPAMD8Q8IZJ3 1885 aa5.6□□□□□ -1.51
LMO3-235ENST00000616247 TNRC18O15417 2968 aaPredicted RBP5.59□□□□□ -1.51
LMO3-235ENST00000616247 A0A1W2PS18 150 aa5.59□□□□□ -1.51
LMO3-235ENST00000616247 FAM166BA8MTA8 275 aa5.59□□□□□ -1.51
LMO3-235ENST00000616247 MLNRO43193 412 aa5.59□□□□□ -1.51
LMO3-235ENST00000616247 FOXH1O75593 365 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms