RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 GLDNQ6ZMI3 551 aaPredicted RBP14.68□□□□□ -0.06
CDX1-202ENST00000616154 ZNF383Q8NA42 475 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 MINDY2Q8NBR6 621 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 BEST4Q8NFU0 473 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 KIAA1456Q9P272 454 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 ANKRD20A5PA0PJZ0 165 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 C3orf84H3BNL1 204 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 J3QRK9 145 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 SPDEFO95238 335 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 IL7P13232 177 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 ZNF660Q6AZW8 331 aaPredicted RBP14.67□□□□□ -0.06
CDX1-202ENST00000616154 ZNF429Q86V71 674 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 PDPNQ86YL7 162 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 TMEM229BQ8NBD8 167 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 OR10J5Q8NHC4 309 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 DEDD2Q8WXF8 326 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 OR5B12Q96R08 314 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 ST6GALNAC5Q9BVH7 336 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 IFT46Q9NQC8 304 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 TAS2R8Q9NYW2 309 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 ANXA10Q9UJ72 324 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 RNF150Q9ULK6 438 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 SMAD5-AS1Q9Y6J3 95 aa14.67□□□□□ -0.06
CDX1-202ENST00000616154 BET1O15155 118 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 LY86O95711 162 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 CD74P04233 296 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 TBPP20226 339 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 NDPQ00604 133 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 KLF9Q13886 244 aaPredicted RBP14.66□□□□□ -0.06
CDX1-202ENST00000616154 RNASE12Q5GAN4 147 aaKnown RBP14.66□□□□□ -0.06
CDX1-202ENST00000616154 H1FOOQ8IZA3 346 aaPredicted RBP14.66□□□□□ -0.06
CDX1-202ENST00000616154 MAFIPQ8WZ33 124 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 DYNC2H1Q8NCM8 4307 aaKnown RBP14.66□□□□□ -0.06
CDX1-202ENST00000616154 OVOL1O14753 267 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 UPK1BO75841 260 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 IGKV1-16P04430 117 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 OR5AP2Q8NGF4 316 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 DCUN1D4Q92564 292 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 C5orf30Q96GV9 206 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 FBXL15Q9H469 300 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 SDHAF2Q9NX18 166 aa14.66□□□□□ -0.06
CDX1-202ENST00000616154 OR8U9P0C7N5 309 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 LINC00205P59089 165 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 TAS2R46P59540 309 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 TAS2R19P59542 299 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 CX3CL1P78423 397 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 IFITM3Q01628 133 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 TAGLNQ01995 201 aaKnown RBP14.65□□□□□ -0.06
CDX1-202ENST00000616154 PSG5Q15238 335 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 ECSCRQ19T08 205 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 TCTEX1D1Q8N7M0 179 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 DRAXINQ8NBI3 349 aaPredicted RBP14.65□□□□□ -0.06
CDX1-202ENST00000616154 TSNAXQ99598 290 aaKnown RBP14.65□□□□□ -0.06
CDX1-202ENST00000616154 OR2D2Q9H210 308 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 FBXO7Q9Y3I1 522 aa14.65□□□□□ -0.06
CDX1-202ENST00000616154 H7C2Y5 167 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 M0R1X1 148 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 SOX15O60248 233 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 APOA2P02652 100 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 CTXN2P0C2S0 81 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 EGR2P11161 476 aaPredicted RBP14.64□□□□□ -0.07
CDX1-202ENST00000616154 DYRK1AQ13627 763 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 ACTBL2Q562R1 376 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 OVCH2Q7RTZ1 564 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 BORCS5Q969J3 196 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 ALX4Q9H161 411 aaPredicted RBP14.64□□□□□ -0.07
CDX1-202ENST00000616154 FOXA2Q9Y261 457 aaPredicted RBP14.64□□□□□ -0.07
CDX1-202ENST00000616154 NUBP2Q9Y5Y2 271 aa14.64□□□□□ -0.07
CDX1-202ENST00000616154 A0A1W2PN81 502 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 LINC01619G3V211 115 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 FCN1O00602 326 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 SAP30O75446 220 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 CD3DP04234 171 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 LGALS1P09382 135 aaKnown RBP14.63□□□□□ -0.07
CDX1-202ENST00000616154 CHRNA7P36544 502 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 SLURP1P55000 103 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 AP3S2P59780 193 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 CDK10Q15131 360 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 TRIQKQ629K1 86 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 STEAP1BQ6NZ63 245 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 ZNF562Q6V9R5 426 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 DDB2Q92466 427 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 DLX4Q92988 240 aaPredicted RBP14.63□□□□□ -0.07
CDX1-202ENST00000616154 GINS4Q9BRT9 223 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 PALMDQ9NP74 551 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 TPSG1Q9NRR2 321 aa14.63□□□□□ -0.07
CDX1-202ENST00000616154 IGLV2-23P01705 113 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 FCER2P06734 321 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 HLA-DMAP28067 261 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 HRH1P35367 487 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 LGALS7P47929 136 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 TMEM177Q53S58 311 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 SBSPONQ8IVN8 264 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 TOMM5Q8N4H5 51 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 FLYWCH2Q96CP2 140 aaKnown RBP14.62□□□□□ -0.07
CDX1-202ENST00000616154 SLC35D1Q9NTN3 355 aa14.62□□□□□ -0.07
CDX1-202ENST00000616154 METTL1Q9UBP6 276 aaKnown RBP14.62□□□□□ -0.07
CDX1-202ENST00000616154 PLA2G10O15496 165 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 TUSC2O75896 110 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 CRYGBP07316 175 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms