RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FAM90A1Q86YD7 464 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 OR51G1Q8NGK1 321 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 FGF11Q92914 225 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 PCGF1Q9BSM1 259 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 ALKBH7Q9BT30 221 aaPredicted RBP3.92□□□□□ -1.78
CHD9-221ENST00000615216 GPR61Q9BZJ8 451 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 RNF115Q9Y4L5 304 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 NLRC5Q86WI3 1866 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 A0A0B4J293 547 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 HLA-DRB1P01911 266 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 APELAP0DMC3 54 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 MEGF10Q96KG7 1140 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 PGLYRP4Q96LB8 373 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 HIST1H4GQ99525 98 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 DLL3Q9NYJ7 618 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 FOXD3Q9UJU5 478 aaPredicted RBP3.92□□□□□ -1.78
CHD9-221ENST00000615216 PILRBQ9UKJ0 227 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 SOX21Q9Y651 276 aaPredicted RBP3.92□□□□□ -1.78
CHD9-221ENST00000615216 TMEM250H0YL14 139 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 AGAP20933 346 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 DLX6P56179 175 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 RND3P61587 244 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 SNRPD3P62318 126 aaKnown RBP3.92□□□□□ -1.78
CHD9-221ENST00000615216 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 OR9G1Q8NH87 305 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 ZNF502Q8TBZ5 544 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 IL17BQ9UHF5 180 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 TICRRQ7Z2Z1 1910 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 PLXND1Q9Y4D7 1925 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 J3KRW8 73 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 LEPROTL1O95214 131 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 HTN1P15515 57 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 CX3CL1P78423 397 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 SLC25A34Q6PIV7 304 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 FGFRL1Q8N441 504 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 ITLN1Q8WWA0 313 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 FMC1Q96HJ9 113 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 TM2D1Q9BX74 207 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 GAGE10A6NGK3 116 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 RBFOX2O43251 390 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-221ENST00000615216 GUCA2BQ16661 112 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 MIC13Q5XKP0 118 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 C1orf162Q8NEQ5 155 aaPredicted RBP3.92□□□□□ -1.78
CHD9-221ENST00000615216 OR52M1Q8NGK5 317 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 ZNF488Q96MN9 340 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 RAXQ9Y2V3 346 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 CACNA1IQ9P0X4 2223 aa3.92□□□□□ -1.78
CHD9-221ENST00000615216 RUNX1Q01196 453 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 HIST1H2BAQ96A08 127 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 DMRT1Q9Y5R6 373 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 C9orf172C9J069 976 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 NPIPB11E5RHQ5 1161 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 ZNF324O75467 553 aaPredicted RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 HBBP68871 147 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 RTN4RL2Q86UN3 420 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 CTHRC1Q96CG8 243 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 GPR146Q96CH1 333 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 MS4A3Q96HJ5 214 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 TCF20Q9UGU0 1960 aaKnown RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 A0A1W2PRD5 423 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 A0A1W2PRF3 423 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 A0A1W2PRM7 423 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 B9A039 149 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 TCF21O43680 179 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 TRGC2P03986 189 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 FTH1P19P0C7X4 201 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 KLK2P20151 261 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 CSRP3P50461 194 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 OR10S1Q8NGN2 331 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 SRXN1Q9BYN0 137 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 WNT5BQ9H1J7 359 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 ABCA7Q8IZY2 2146 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 TMSB15BA0A087X1C1 80 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 A0A1W2PPE3 182 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 DDTP30046 118 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 CA7P43166 264 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 SAPCD1Q5SSQ6 148 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 TMEM183AQ8IXX5 376 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 CCL19Q99731 98 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 SPOCK3Q9BQ16 436 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 CACNA1DQ01668 2161 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 LOC105371242A0A075B767 164 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 LIPFP07098 398 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 CDX1P47902 265 aaPredicted RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 TFF2Q03403 129 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 ASPHD2Q6ICH7 369 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 KLF14Q8TD94 323 aaPredicted RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 SAP25Q8TEE9 199 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 PLSCR2Q9NRY7 297 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 hCG_38984A0A1B0GV85 526 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 H7C1H1 209 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 SYNGR3O43761 229 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 PDLIM4P50479 330 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 PLP1P60201 277 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 ZNF506Q5JVG8 444 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 RHOVQ96L33 236 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 AUP1Q9Y679 476 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 TGIF2-C20orf24A0A0A6YYL0 155 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 PQLC2LA1A4F0 135 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms