RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SPINK9Q5DT21 86 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 LY6G6FQ5SQ64 297 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 AADACL3Q5VUY0 350 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 FOXRED2Q8IWF2 684 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 MINDY2Q8NBR6 621 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 CHPT1Q8WUD6 406 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ACOT12Q8WYK0 555 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 P2RX4Q99571 388 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 C6orf62Q9GZU0 229 aaPredicted RBP4.41□□□□□ -1.7
CPNE3-208ENST00000614678 SLC5A7Q9GZV3 580 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 RBM38Q9H0Z9 239 aaKnown RBP4.41□□□□□ -1.7
CPNE3-208ENST00000614678 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IGHV3-21A0A0B4J1V1 117 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 M0QZK8 103 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 PF4P02776 101 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IL6RP08887 468 aaPredicted RBP4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF45Q02386 682 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 TEX38Q6PEX7 206 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF695Q8IW36 515 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 FAM219AQ8IW50 185 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF355PQ9NSJ1 428 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IGHV3-35A0A0C4DH35 117 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 I3L521 148 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 CCL24O00175 119 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 TXNL1O43396 289 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 IGKV1-39P01597 117 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 IGKV1D-39P04432 117 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 PRSS3P35030 304 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 SP6Q3SY56 376 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF585BQ52M93 769 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 ACTBL2Q562R1 376 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF491Q8N8L2 437 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 IFT46Q9NQC8 304 aa4.4□□□□□ -1.7
CPNE3-208ENST00000614678 ITGB1BP1O14713 200 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 CNIH1O95406 144 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 IGHV3-48P01763 117 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 CD33P20138 364 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 VDAC1P21796 283 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 CDK10Q15131 360 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 DLX4Q92988 240 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-208ENST00000614678 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-208ENST00000614678 KIAA1456Q9P272 454 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 ANAPC10Q9UM13 185 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 CCDC160A6NGH7 325 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 ATP6V1G1O75348 118 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 APOA1P02647 267 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 G6PCP35575 357 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 PPP5CP53041 499 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 TMEM177Q53S58 311 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 PDPNQ86YL7 162 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 SPAG16Q8N0X2 631 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 ARPC1AQ92747 370 aa4.4□□□□□ -1.71
CPNE3-208ENST00000614678 IGHV3OR16-8A0A075B7F1 116 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 K7EIL1 84 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 PGLYRP1O75594 196 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-208ENST00000614678 RPL5P46777 297 aaKnown RBP4.39□□□□□ -1.71
CPNE3-208ENST00000614678 OR2B8PP59922 312 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 DYRK1AQ13627 763 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 ZNF562Q6V9R5 426 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 MYOZ3Q8TDC0 251 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 PRR25Q96S07 402 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 SCOCQ9UIL1 159 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 A0A0G2JRQ6 117 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 TEX22C9J3V5 150 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 KRASP01116 189 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 APOA2P02652 100 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 OR9G9P0C7N8 305 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 TNFSF8P32971 234 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 MC5RP33032 325 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 TPPP2P59282 170 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 PRSS8Q16651 343 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 OR4A47Q6IF82 309 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 GSG1LQ6UXU4 331 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 SRSF12Q8WXF0 261 aaKnown RBP4.39□□□□□ -1.71
CPNE3-208ENST00000614678 DCUN1D4Q92564 292 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 RHOVQ96L33 236 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 FYTTD1Q96QD9 318 aaKnown RBP4.39□□□□□ -1.71
CPNE3-208ENST00000614678 PPP5D1E7EU14 171 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 H3BUI4 141 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 NXPH3O95157 252 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 ZNF735P0CB33 412 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 PITPNAQ00169 270 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 SRSF7Q16629 238 aaKnown RBP eCLIP4.39□□□□□ -1.71
CPNE3-208ENST00000614678 TMEM30BQ3MIR4 351 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 DHRS11Q6UWP2 260 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 WFDC9Q8NEX5 89 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 OR4F17Q8NGA8 305 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 OR5H2Q8NGV7 314 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 DIRAS2Q96HU8 199 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 OR4F4Q96R69 305 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 RAB9BQ9NP90 201 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 LYSTQ99698 3801 aa4.39□□□□□ -1.71
CPNE3-208ENST00000614678 RANBP1P43487 201 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 MFAP2P55001 183 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 ZNF79Q15937 498 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 SCGB2B2Q4G0G5 96 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 PDLIM3Q53GG5 364 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 FAM71F2Q6NXP2 309 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 MRAPQ8TCY5 172 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 GIMAP1Q8WWP7 306 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms