RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SLC25A40Q8TBP6 338 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 OR2J1Q9GZK6 312 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 POLR3KQ9Y2Y1 108 aaPredicted RBP9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 P0C879 139 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 TRAT1Q6PIZ9 186 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 KLF14Q8TD94 323 aaPredicted RBP9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 TXN2Q99757 166 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 RNF212BA8MTL3 300 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 NKX2-8O15522 239 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 GYPAP02724 150 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 C1QTNF9P0C862 333 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 MMDQ15546 238 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 SPATA46Q5T0L3 261 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 NOL4LQ96MY1 436 aaPredicted RBP9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 ZNF71Q9NQZ8 489 aaPredicted RBP9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 DKK4Q9UBT3 224 aa9.09□□□□□ -0.95
SENP3-EIF4A1-201ENST00000614237 TNFSF13O75888 250 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CELA3BP08861 270 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CDKN1AP38936 164 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 PSMB3P49720 205 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 TDGF1P3P51864 188 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 EDDM3BP56851 147 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 LINC00205P59089 165 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 RPL23P62829 140 aaKnown RBP9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 LIN7CQ9NUP9 197 aaKnown RBP9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CLN8Q9UBY8 286 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 PLCE1Q9P212 2302 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SPTBN2O15020 2390 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CNN1P51911 297 aaKnown RBP9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 WNT10AQ9GZT5 417 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CADP27708 2225 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 TRAV38-1A0A0B4J264 116 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MARCH11A6NNE9 402 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SLC17A3O00476 420 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 IFNA1P01562 189 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MAS1LP35410 378 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 C9orf106Q8NAJ2 232 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SGMS2Q8NHU3 365 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MANBALQ9NQG1 85 aa9.08□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 A0A087WWC5 75 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 OOEPA6NGQ2 149 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 F2Z2F3 143 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MLNRO43193 412 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 DLEU1O43261 78 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 NDUFB4O95168 129 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 HINT1P49773 126 aaPredicted RBP9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ERVFC1-1P60608 527 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 AARDQ4LEZ3 155 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 OR10G4Q8NGN3 311 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 TRIB1Q96RU8 372 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SPOCK3Q9BQ16 436 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SRD5A3Q9H8P0 318 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 OR1A1Q9P1Q5 309 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 VAX2Q9UIW0 290 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 TMEM30CPA0ZSE6 113 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 H0Y8G0 127 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 HAND1O96004 215 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 IGKV1-39P01597 117 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 IGKV1D-39P04432 117 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SFTPCP11686 197 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ACP7Q6ZNF0 438 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ZNF645Q8N7E2 425 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 OR5R1Q8NH85 324 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 STARD4Q96DR4 205 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MED12LQ86YW9 2145 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MED13Q9UHV7 2174 aa9.07□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 IGKV1D-33P01593 117 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 IGKV1-33P01594 117 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ZNF585BQ52M93 769 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 FFAR4Q5NUL3 377 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CENPVQ7Z7K6 275 aaPredicted RBP9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CMTM2Q8TAZ6 248 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 VAMP8Q9BV40 100 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 TFF1P04155 84 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 WT1P19544 449 aaPredicted RBP9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 HTD2P86397 168 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 DEFB124Q8NES8 71 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 PSMG3Q9BT73 122 aaPredicted RBP9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SLC25A15Q9Y619 301 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ITGB1BP1O14713 200 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 TM4SF5O14894 197 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 PRB4P10163 310 aaPredicted RBP9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 MPV17P39210 176 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ATP5G3P48201 142 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CCL11P51671 97 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 CD81P60033 236 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SLC38A11Q08AI6 406 aa9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms