RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 LY6DQ14210 128 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 IBA57Q5T440 356 aaKnown RBP17.16■□□□□ 0.34
CTDP1-208ENST00000613122 TGFBR3LH3BV60 316 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 AP4M1O00189 453 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 DRAM1Q8N682 238 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 OR51G1Q8NGK1 321 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 SLC25A38Q96DW6 304 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 PACRGQ96M98 296 aaPredicted RBP17.16■□□□□ 0.34
CTDP1-208ENST00000613122 PTBP3O95758 552 aaKnown RBP17.16■□□□□ 0.34
CTDP1-208ENST00000613122 C8orf88P0DMB2 117 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 SEC16AO15027 2179 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 PIN1P1O15428 100 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 ANOS1P23352 680 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 GALNT14Q96FL9 552 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 OR51M1Q9H341 326 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 RPS20P60866 119 aaKnown RBP17.15■□□□□ 0.34
CTDP1-208ENST00000613122 WDR25Q64LD2 544 aaPredicted RBP17.15■□□□□ 0.34
CTDP1-208ENST00000613122 PEAR1Q5VY43 1037 aaPredicted RBP17.15■□□□□ 0.34
CTDP1-208ENST00000613122 ZNF343Q6P1L6 599 aa17.15■□□□□ 0.34
CTDP1-208ENST00000613122 ZNF324O75467 553 aaPredicted RBP17.15■□□□□ 0.34
CTDP1-208ENST00000613122 BTF3P20290 206 aaKnown RBP17.15■□□□□ 0.34
CTDP1-208ENST00000613122 RPL39P5Q59GN2 51 aa17.15■□□□□ 0.34
CTDP1-208ENST00000613122 FAM216BQ8N7L0 139 aa17.15■□□□□ 0.34
CTDP1-208ENST00000613122 SBF2Q86WG5 1849 aa17.15■□□□□ 0.34
CTDP1-208ENST00000613122 FAM201AQ5SY85 155 aa17.14■□□□□ 0.34
CTDP1-208ENST00000613122 TRIOBPQ9H2D6 2365 aa17.14■□□□□ 0.34
CTDP1-208ENST00000613122 DOCK3Q8IZD9 2030 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 IGKV1D-33P01593 117 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 IGKV1-33P01594 117 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 SGMS2Q8NHU3 365 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 DPH3Q96FX2 82 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 BET1LQ9NYM9 111 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 IGHV3-35A0A0C4DH35 117 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 A0A0G2JLM5 398 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 TMEM14DPA8MWL7 114 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 GCSHP23434 173 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 CKS2P33552 79 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 C7orf66A4D0T2 115 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 C17orf100A8MU93 164 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 NUTF2P61970 127 aaKnown RBP17.14■□□□□ 0.33
CTDP1-208ENST00000613122 HERPUD1Q15011 391 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 POC1AQ8NBT0 407 aa17.14■□□□□ 0.33
CTDP1-208ENST00000613122 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.33
CTDP1-208ENST00000613122 IL4P05112 153 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 CD59P13987 128 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 SMDT1Q9H4I9 107 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 IGLV3-12A0A075B6K2 115 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 ASPHD2Q6ICH7 369 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 NPIPB3Q92617 1050 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 EFEMP2O95967 443 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 ZFP36L1Q07352 338 aaKnown RBP17.13■□□□□ 0.33
CTDP1-208ENST00000613122 CBLN4Q9NTU7 201 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 HKR1P10072 659 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 SULT1A2P50226 295 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 ZNF502Q8TBZ5 544 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 RAB24Q969Q5 203 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 PRO1933Q9H354 126 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 CDC42EP3Q9UKI2 254 aa17.13■□□□□ 0.33
CTDP1-208ENST00000613122 CD99P14209 185 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 UCP3P55916 312 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 CD200R1LQ6Q8B3 271 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 CYB561D1Q8N8Q1 229 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 TBX15Q96SF7 602 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 LOC102723996A0A087X1L8 192 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 LHX2P50458 406 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 CD81P60033 236 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 HIST1H1AQ02539 215 aaPredicted RBP17.12■□□□□ 0.33
CTDP1-208ENST00000613122 IGKV3-20P01619 116 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 ATP5IP56385 69 aaPredicted RBP17.12■□□□□ 0.33
CTDP1-208ENST00000613122 C19orf24Q9BVV8 132 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 FBXL15Q9H469 300 aa17.12■□□□□ 0.33
CTDP1-208ENST00000613122 MEF2CQ06413 473 aaPredicted RBP17.11■□□□□ 0.33
CTDP1-208ENST00000613122 C1QTNF5Q9BXJ0 243 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 ELF5Q9UKW6 265 aaPredicted RBP17.11■□□□□ 0.33
CTDP1-208ENST00000613122 OR4C46A6NHA9 309 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 OSR1Q8TAX0 266 aaPredicted RBP17.11■□□□□ 0.33
CTDP1-208ENST00000613122 JMJD8Q96S16 334 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 MOB4Q9Y3A3 225 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 PSG7Q13046 419 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 CBLN2Q8IUK8 224 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 PPP1R27Q86WC6 154 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 MRPL32Q9BYC8 188 aaKnown RBP17.11■□□□□ 0.33
CTDP1-208ENST00000613122 ZFP30Q9Y2G7 519 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 IGHV3-23P01764 117 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 NCMAPQ5T1S8 102 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 SMIM8Q96KF7 97 aa17.11■□□□□ 0.33
CTDP1-208ENST00000613122 IGHV3-48P01763 117 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 C5orf66Q9H5L9 145 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 C12orf77C9JDV5 145 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 E9PLN8 166 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 NPIPB9F8W1W9 429 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 MEF2BQ02080 365 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-208ENST00000613122 VKORC1Q9BQB6 163 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 A0A0B4J293 547 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 CBY3A6NI87 242 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 CD300CQ08708 224 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 TMEM177Q53S58 311 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-208ENST00000613122 H3BTX0 84 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 ARL14EPLP0DKL9 152 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms