RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 MRGPRG-AS1Q2M3A8 158 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 DEFB136Q30KP8 78 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 AKIRIN2Q53H80 203 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 ACTBL2Q562R1 376 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 TMEM65Q6PI78 240 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 DHRS11Q6UWP2 260 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 MRPL41Q8IXM3 137 aaKnown RBP14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 LFNGQ8NES3 379 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 WFDC9Q8NEX5 89 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 OR5M8Q8NGP6 311 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 C4orf3Q8WVX3 66 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 CEPT1Q9Y6K0 416 aa14.09□□□□□ -0.15
SEMA3B-211ENST00000612509 CTDSP2O14595 271 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 CNIH1O95406 144 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 PRSS8Q16651 343 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 BEAN1Q3B7T3 259 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 PYHIN1Q6K0P9 492 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 OR52I2Q8NH67 350 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 BORCS5Q969J3 196 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 RAX2Q96IS3 184 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 DUX3Q96PT4 197 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 P2RX4Q99571 388 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 GNB4Q9HAV0 340 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 NOTCH1P46531 2555 aa14.08□□□□□ -0.16
SEMA3B-211ENST00000612509 CREBL2O60519 120 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 GNRHRP30968 328 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 RAB9AP51151 201 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 KIAA0141Q14154 515 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 TNXAQ16473 311 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 OXLD1Q5BKU9 147 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 KPRPQ5T749 579 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 AADACL3Q5VUY0 350 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 VKORC1L1Q8N0U8 176 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 SPAG16Q8N0X2 631 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 ZNF491Q8N8L2 437 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 OR6F1Q8NGZ6 308 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 OR51H1Q8NH63 302 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 CASTOR1Q8WTX7 329 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 C15orf40Q8WUR7 153 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 UBE2E2Q96LR5 201 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 ABHD1Q96SE0 405 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 SLIRPQ9GZT3 109 aaKnown RBP14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 C6orf62Q9GZU0 229 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 VSIG4Q9Y279 399 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 NOTCH3Q9UM47 2321 aa14.07□□□□□ -0.16
SEMA3B-211ENST00000612509 TNCP24821 2201 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 CCL24O00175 119 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 RBFOX2O43251 390 aaKnown RBP eCLIP14.06□□□□□ -0.161e-11■■■□□ 15.8
SEMA3B-211ENST00000612509 RAMP3O60896 148 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 IGLL1P15814 213 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 TSPAN5P62079 268 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 VAX1Q5SQQ9 334 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 VSTM2AQ8TAG5 236 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 SRSF12Q8WXF0 261 aaKnown RBP14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 RCC1LQ96I51 464 aaKnown RBP14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 ZNF430Q9H8G1 570 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 KLK11Q9UBX7 282 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 MTFP1Q9UDX5 166 aa14.06□□□□□ -0.16
SEMA3B-211ENST00000612509 CCDC160A6NGH7 325 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 M0QYG6 137 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 KBTBD11O94819 623 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 RLN1P04808 185 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 ASPHD1Q5U4P2 390 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 MMD2Q8IY49 270 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 PUSL1Q8N0Z8 303 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 POC5Q8NA72 575 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 PHB2Q99623 299 aa14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 RBM38Q9H0Z9 239 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-211ENST00000612509 GPR31O00270 319 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 WIPF1O43516 503 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 OR2A4O95047 310 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 HRASP01112 189 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 RAB25P57735 213 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 TPPP2P59282 170 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 MRPS10P82664 201 aaKnown RBP14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 DGCR2P98153 550 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 FHL3Q13643 280 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 RNASE10Q5GAN6 216 aaKnown RBP14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 C10orf55Q5SWW7 151 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 FCAMRQ8WWV6 532 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 DIRAS2Q96HU8 199 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 RHOVQ96L33 236 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 TMEM68Q96MH6 324 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 OR5B12Q96R08 314 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 OR2A7Q96R45 310 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 SLA2Q9H6Q3 261 aa14.04□□□□□ -0.16
SEMA3B-211ENST00000612509 DNAH3Q8TD57 4116 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 H3BUA1 57 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 GABARAPH6UMI1 98 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 I3L521 148 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 ACTL6BO94805 426 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 DUS4LO95620 317 aaKnown RBP14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 TBPP20226 339 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 CD40LGP29965 261 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 TAS2R31P59538 309 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 RUNX1Q01196 453 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 SSX9Q7RTT3 188 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 CMTM1Q8IZ96 169 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 OR11H1Q8NG94 326 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 TMEM167AQ8TBQ9 72 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms