RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 RPL30P62888 115 aaKnown RBP14.03□□□□□ -0.16
VCX3A-203ENST00000612369 TNXAQ16473 311 aa14.03□□□□□ -0.16
VCX3A-203ENST00000612369 ACSM6Q6P461 480 aa14.03□□□□□ -0.16
VCX3A-203ENST00000612369 MMD2Q8IY49 270 aa14.03□□□□□ -0.16
VCX3A-203ENST00000612369 GVQW1Q8N7I0 195 aa14.03□□□□□ -0.16
VCX3A-203ENST00000612369 OR4S2Q8NH73 311 aa14.03□□□□□ -0.16
VCX3A-203ENST00000612369 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
VCX3A-203ENST00000612369 USMG5Q96IX5 58 aa14.03□□□□□ -0.16
VCX3A-203ENST00000612369 SAA1P0DJI8 122 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-203ENST00000612369 ZP3P21754 424 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 RPS19P39019 145 aaKnown RBP14.02□□□□□ -0.17
VCX3A-203ENST00000612369 EIF4EBP1Q13541 118 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-203ENST00000612369 IDO2Q6ZQW0 420 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 MFSD4AQ8N468 514 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 VSTM2AQ8TAG5 236 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 ACOT12Q8WYK0 555 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 SPIN2AQ99865 258 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 SPIN2BQ9BPZ2 258 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 ZNF430Q9H8G1 570 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-203ENST00000612369 COA4Q9NYJ1 87 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 TNCP24821 2201 aa14.02□□□□□ -0.17
VCX3A-203ENST00000612369 SORL1Q92673 2214 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 OR9G9P0C7N8 305 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 NHLRC4P0CG21 123 aaPredicted RBP14.01□□□□□ -0.17
VCX3A-203ENST00000612369 FCGR2CP31995 323 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 UBE2NLQ5JXB2 153 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 OR5AP2Q8NGF4 316 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 OR6Q1Q8NGQ2 317 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 TCTEX1D2Q8WW35 142 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 OR4C12Q96R67 309 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 ELOVL1Q9BW60 279 aa14.01□□□□□ -0.17
VCX3A-203ENST00000612369 TRIM64CA6NLI5 447 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 MPPED1O15442 326 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 PPYP01298 95 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 TGFBR1P36897 503 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 KIR2DS2P43631 304 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 OR2B11Q5JQS5 317 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 ADAD2Q8NCV1 583 aaKnown RBP14□□□□□ -0.17
VCX3A-203ENST00000612369 OR13F1Q8NGS4 319 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 GIMAP1Q8WWP7 306 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 KCTD12Q96CX2 325 aaKnown RBP14□□□□□ -0.17
VCX3A-203ENST00000612369 AIFM2Q9BRQ8 373 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 TAS2R8Q9NYW2 309 aa14□□□□□ -0.17
VCX3A-203ENST00000612369 DNAH9Q9NYC9 4486 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 OR2A4O95047 310 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 LY86O95711 162 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 HRASP01112 189 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 MAS1LP35410 378 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 LSM3P62310 102 aaKnown RBP13.99□□□□□ -0.17
VCX3A-203ENST00000612369 ZNF343Q6P1L6 599 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 SLC25A42Q86VD7 318 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 SAMD12Q8N8I0 201 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 SECTM1Q8WVN6 248 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 SNAPC3Q92966 411 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 BORCS5Q969J3 196 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 OR2A7Q96R45 310 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 CCL28Q9NRJ3 127 aa13.99□□□□□ -0.17
VCX3A-203ENST00000612369 PEF1Q9UBV8 284 aaKnown RBP13.99□□□□□ -0.17
VCX3A-203ENST00000612369 KBTBD11O94819 623 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 PTHLHP12272 177 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 BRWD1-AS2P59051 145 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 DYRK1AQ13627 763 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 TMEM69Q5SWH9 247 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 C11orf87Q6NUJ2 197 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 PUSL1Q8N0Z8 303 aaKnown RBP13.98□□□□□ -0.17
VCX3A-203ENST00000612369 TTC9CQ8N5M4 171 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 TMEM167AQ8TBQ9 72 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 SLC25A46Q96AG3 418 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 IFT46Q9NQC8 304 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 SMAD5-AS1Q9Y6J3 95 aa13.98□□□□□ -0.17
VCX3A-203ENST00000612369 FAM223BA6NKX1 122 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 RBFOX2O43251 390 aaKnown RBP eCLIP13.97□□□□□ -0.17
VCX3A-203ENST00000612369 APELAP0DMC3 54 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 CATR1Q13166 79 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 KLF5Q13887 457 aaPredicted RBP13.97□□□□□ -0.17
VCX3A-203ENST00000612369 TATDN3Q17R31 274 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 FAM223AQ8IWN6 122 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 CMTM3Q96MX0 182 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 SLC5A7Q9GZV3 580 aa13.97□□□□□ -0.17
VCX3A-203ENST00000612369 TRBV9A0A0B4J1U6 114 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 ANKRD34BA5PLL1 514 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 GP9P14770 177 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 SPNP16150 400 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 TAS2R20P59543 309 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 FAM209BQ5JX69 171 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 DHRS11Q6UWP2 260 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 VKORC1L1Q8N0U8 176 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 FUNDC2Q9BWH2 189 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 ANAPC10Q9UM13 185 aa13.96□□□□□ -0.17
VCX3A-203ENST00000612369 TNFSF12O43508 249 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 NAT1P18440 290 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 PRSS3P35030 304 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 RPL27AP46776 148 aaKnown RBP13.95□□□□□ -0.18
VCX3A-203ENST00000612369 FXYD4P59646 89 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 HERV-K104P61576 105 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 RHOGP84095 191 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 C10orf55Q5SWW7 151 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 ANKRD13BQ86YJ7 626 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 SPAG16Q8N0X2 631 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms