RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 GDPD1Q8N9F7 314 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 ZBTB34Q8NCN2 500 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 OR51S1Q8NGJ8 323 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 OR13C8Q8NGS7 320 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 OR51H1Q8NH63 302 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 FBXL15Q9H469 300 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SLC2A9Q9NRM0 540 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SLC2A8Q9NY64 477 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 IGHV7-81A0A0B4J1V7 117 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 TCRBV4S1A1TA0A5B7 111 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 PSMB11A5LHX3 300 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 SRRM4A7MD48 611 aaKnown RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 G3V318 75 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 FCN1O00602 326 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 SHOXO15266 292 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 RBFOX2O43251 390 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNCA-212ENST00000611107 RPLP1P05386 114 aaKnown RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 CRYGBP07316 175 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 SAA1P0DJI8 122 aaPredicted RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 RRASP10301 218 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 IL7P13232 177 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 IGLL1P15814 213 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 PI3P19957 117 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 RPS16P62249 146 aaKnown RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 TAGLNQ01995 201 aaKnown RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 ZNF45Q02386 682 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 CFHR3Q02985 330 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 CATR1Q13166 79 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 KIAA0141Q14154 515 aaPredicted RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 MRGPRG-AS1Q2M3A8 158 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 KPRPQ5T749 579 aaPredicted RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 TRIQKQ629K1 86 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 IDO2Q6ZQW0 420 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 SLC35E3Q7Z769 313 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 SPAG16Q8N0X2 631 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 STPG2Q8N412 459 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 TOMM5Q8N4H5 51 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 OR4S2Q8NH73 311 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 TERB2Q8NHR7 220 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 MARCH1Q8TCQ1 289 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 BORCS5Q969J3 196 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 FLYWCH2Q96CP2 140 aaKnown RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 TSNAXQ99598 290 aaKnown RBP6.78□□□□□ -1.32
SNCA-212ENST00000611107 RNF5Q99942 180 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 PRRT1Q99946 306 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 HRASLSQ9HDD0 168 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 KIAA1456Q9P272 454 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 PRELID3BQ9Y3B1 194 aa6.78□□□□□ -1.32
SNCA-212ENST00000611107 DISC1C4P0D8 188 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 PGLYRP1O75594 196 aaPredicted RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 S1PR2O95136 353 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 EGR2P11161 476 aaPredicted RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 PGAM2P15259 253 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 BTCP35070 178 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 KIR2DS2P43631 304 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 AP3S2P59780 193 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 KRTAP10-11P60412 298 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 RND3P61587 244 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 PJVKQ0ZLH3 352 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 CBX3Q13185 183 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 SURF2Q15527 256 aaPredicted RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 ZNF57Q68EA5 555 aaPredicted RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 TBC1D26Q86UD7 250 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 CMTM1Q8IZ96 169 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 OSR1Q8TAX0 266 aaPredicted RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 DEDD2Q8WXF8 326 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 ZNF486Q96H40 463 aaPredicted RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 RASL11BQ9BPW5 248 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 KLK15Q9H2R5 256 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 C5orf66Q9H5L9 145 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 MCUBQ9NWR8 336 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 METTL1Q9UBP6 276 aaKnown RBP6.77□□□□□ -1.33
SNCA-212ENST00000611107 VSIG4Q9Y279 399 aa6.77□□□□□ -1.33
SNCA-212ENST00000611107 ATP6V0E1O15342 81 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 CA2P00918 260 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 CTSDP07339 412 aaPredicted RBP6.76□□□□□ -1.33
SNCA-212ENST00000611107 F2RP25116 425 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 CD40LGP29965 261 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 FAUP35544 74 aaKnown RBP6.76□□□□□ -1.33
SNCA-212ENST00000611107 ECI1P42126 302 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 LGALS7P47929 136 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 PIGPP57054 158 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 UBE2KP61086 200 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 RPL23AP62750 156 aaKnown RBP6.76□□□□□ -1.33
SNCA-212ENST00000611107 PLGLAQ15195 96 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 POU2AF1Q16633 256 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 ZNF585BQ52M93 769 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 C19orf54Q5BKX5 351 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 KHDC1LQ5JSQ8 128 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 LPCAT3Q6P1A2 487 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 PPP1R27Q86WC6 154 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 VKORC1L1Q8N0U8 176 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 LINC00482Q8N8I6 264 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 CASTOR1Q8WTX7 329 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 S100ZQ8WXG8 99 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 TMEM230Q96A57 120 aa6.76□□□□□ -1.33
SNCA-212ENST00000611107 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms