RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 CCL28Q9NRJ3 127 aa14.93□□□□□ -0.02
TCF3-219ENST00000610756 SMIM31A0A1B0GVY4 71 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 MEIS3P1A6NDR6 274 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 MSGN1A6NI15 193 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 K7EIL1 84 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 EIF4EP06730 217 aaKnown RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 LGALS1P09382 135 aaKnown RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 TPPP2P59282 170 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 IDO2Q6ZQW0 420 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 POC5Q8NA72 575 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 OR4S2Q8NH73 311 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 TCTEX1D2Q8WW35 142 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 ALX4Q9H161 411 aaPredicted RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 TAS2R8Q9NYW2 309 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 SCOCQ9UIL1 159 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 WI2-2373I1.2A0A1W2PRP0 233 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 SEC14L6B5MCN3 397 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 CREBL2O60519 120 aaPredicted RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 RAMP3O60896 148 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 GABARAPO95166 117 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 TRGV3P03979 118 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 SAA1P0DJI8 122 aaPredicted RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 MRPS26Q9BYN8 205 aaKnown RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 SLC5A7Q9GZV3 580 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 NAA50Q9GZZ1 169 aaKnown RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 ZNF430Q9H8G1 570 aaPredicted RBP14.92□□□□□ -0.02
TCF3-219ENST00000610756 ZNF355PQ9NSJ1 428 aa14.92□□□□□ -0.02
TCF3-219ENST00000610756 A0A0G2JLM5 398 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 LINC01619G3V211 115 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 HSPB1P04792 205 aaKnown RBP14.91□□□□□ -0.02
TCF3-219ENST00000610756 KIR2DS2P43631 304 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 RFX2P48378 723 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 INSL3P51460 131 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 DGCR2P98153 550 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 DYRK1AQ13627 763 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 TNXAQ16473 311 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 OR2B11Q5JQS5 317 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 LYSMD2Q8IV50 215 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 MMD2Q8IY49 270 aa14.91□□□□□ -0.02
TCF3-219ENST00000610756 ACTL6BO94805 426 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 OR2A4O95047 310 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 IGHV3-11P01762 117 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 ELK1P19419 428 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 ALDH3B2P48448 385 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 GPR107Q5VW38 600 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 VSTM2AQ8TAG5 236 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 GPX8Q8TED1 209 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 SRSF12Q8WXF0 261 aaKnown RBP14.9□□□□□ -0.02
TCF3-219ENST00000610756 DCUN1D4Q92564 292 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 OR2A7Q96R45 310 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 GPHA2Q96T91 129 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 AIFM2Q9BRQ8 373 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 TINAGL1Q9GZM7 467 aaPredicted RBP14.9□□□□□ -0.02
TCF3-219ENST00000610756 EHFQ9NZC4 300 aa14.9□□□□□ -0.02
TCF3-219ENST00000610756 RBFOX2O43251 390 aaKnown RBP eCLIP14.89□□□□□ -0.035e-7■■□□□ 13.9
TCF3-219ENST00000610756 TNFSF12O43508 249 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 HPGDSO60760 199 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 HRASP01112 189 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 ZNF182P17025 639 aaPredicted RBP14.89□□□□□ -0.03
TCF3-219ENST00000610756 GNRHRP30968 328 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 TAS2R46P59540 309 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 FXYD4P59646 89 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 MZT2AQ6P582 158 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 VKORC1L1Q8N0U8 176 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 PUSL1Q8N0Z8 303 aaKnown RBP14.89□□□□□ -0.03
TCF3-219ENST00000610756 AP3S1Q92572 193 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 DLX4Q92988 240 aaPredicted RBP14.89□□□□□ -0.03
TCF3-219ENST00000610756 BORCS5Q969J3 196 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 PHB2Q99623 299 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 SPIN2AQ99865 258 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 SPIN2BQ9BPZ2 258 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 SCPEP1Q9HB40 452 aa14.89□□□□□ -0.03
TCF3-219ENST00000610756 IGHV4OR15-8A0A075B7B6 117 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 A0A087WW49 117 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 C13orf42A0A1B0GVH6 325 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 OVOL1O14753 267 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 PMP2P02689 132 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 DEFB121Q5J5C9 76 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 ZNF818PQ6ZRF7 136 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 GPR141Q7Z602 305 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 SPAG16Q8N0X2 631 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 ADAD2Q8NCV1 583 aaKnown RBP14.88□□□□□ -0.03
TCF3-219ENST00000610756 OR5H2Q8NGV7 314 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 OR6F1Q8NGZ6 308 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 TMEM167AQ8TBQ9 72 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 USMG5Q96IX5 58 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 RANGRFQ9HD47 186 aaPredicted RBP14.88□□□□□ -0.03
TCF3-219ENST00000610756 ADAM30Q9UKF2 790 aa14.88□□□□□ -0.03
TCF3-219ENST00000610756 SULT1C2O00338 296 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 KBTBD11O94819 623 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 OR9G9P0C7N8 305 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 APELAP0DMC3 54 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 MAS1LP35410 378 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 SLURP1P55000 103 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 HERV-K104P61576 105 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 ZNF429Q86V71 674 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 TTC9CQ8N5M4 171 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 CD300LFQ8TDQ1 290 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 MOB3AQ96BX8 217 aa14.87□□□□□ -0.03
TCF3-219ENST00000610756 ZNF2Q9BSG1 426 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms