RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ZNF439Q8NDP4 499 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 LILRB1Q8NHL6 650 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 GALNT14Q96FL9 552 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 LYRM2Q9NU23 88 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 TECRQ9NZ01 308 aaKnown RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 A0A0G2JNJ9 132 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 G3V3Q6 166 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 ERVH48-1M5A8F1 160 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CHEK1O14757 476 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 PLAUP00749 431 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 FBP1P09467 338 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF735P0CB33 412 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 TDGF1P13385 188 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 FAM166AQ6J272 317 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF474Q6S9Z5 364 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-218ENST00000610726 H1FOOQ8IZA3 346 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-218ENST00000610726 OR8I2Q8N0Y5 310 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 FAM216AQ8WUB2 273 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 WFIKKN1Q96NZ8 548 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CLEC7AQ9BXN2 247 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 PARP11Q9NR21 331 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 Q9UFV3 132 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 MSRB2Q9Y3D2 182 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 SLC25A15Q9Y619 301 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CLDN34H7C241 214 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 WT1P19544 449 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-218ENST00000610726 UCP1P25874 307 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 GNG4P50150 75 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 AWAT1Q58HT5 328 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 C1QTNF12Q5T7M4 302 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 PIP4P1Q86T03 277 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CBLN2Q8IUK8 224 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 WDFY1Q8IWB7 410 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 MMD2Q8IY49 270 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 OR4C13Q8NGP0 309 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 COL4A3Q01955 1670 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 KBTBD11-OT1A0A1B0GTJ5 212 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CTXND1A0A1B0GTU2 59 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CEACAM18A8MTB9 384 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 LDLRAD4O15165 306 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 PSPNO60542 156 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 KBTBD11O94819 623 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CD8AP01732 235 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 IGHV1-46P01743 117 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 NTF3P20783 257 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 SULT1A2P50226 295 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 PAX5Q02548 391 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 MIC13Q5XKP0 118 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 MYPOPQ86VE0 399 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-218ENST00000610726 CLRN3Q8NCR9 226 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 FAM222BQ8WU58 562 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 TMEM37Q8WXS4 190 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 TAF15Q92804 592 aaKnown RBP eCLIP6.12□□□□□ -1.43
CSDE1-218ENST00000610726 RSRP1Q9BUV0 290 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 TRAF4Q9BUZ4 470 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-218ENST00000610726 SH3BGRL3Q9H299 93 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 PLSCR2Q9NRY7 297 aa6.12□□□□□ -1.43
CSDE1-218ENST00000610726 TRBV6-7A0A0A0MS04 114 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SERTM2A0A1B0GWG4 89 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 MBD3L4A6NDZ8 208 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 MBD3L3A6NE82 208 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 MBD3L5A6NJ08 208 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 GOSR1O95249 250 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 FAM157CP0CG43 387 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 LCN2P80188 198 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 TCF15Q12870 199 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 UNQ6494/PRO21346Q6UXR6 183 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 PDPNQ86YL7 162 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 MBD3L2Q8NHZ7 208 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 IL22RA2Q969J5 263 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 TMEM186Q96B77 213 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 VAX2Q9UIW0 290 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 PXMP4Q9Y6I8 212 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 DBX1A6NMT0 343 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 MMP9P14780 707 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 CTRB1P17538 263 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 HIST1H3AP68431 136 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SERF2P84101 59 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 BSXQ3C1V8 233 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 CTRB2Q6GPI1 263 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 GTF3AQ92664 365 aaKnown RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 LSM10Q969L4 123 aaKnown RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 QTRT1Q9BXR0 403 aaKnown RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 TMEM167BQ9NRX6 74 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SPTBN4Q9H254 2564 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 RND2P52198 227 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 BATFQ16520 125 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SIGIRRQ6IA17 410 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 Q8WTZ3 238 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 PERPQ96FX8 193 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 TUBD1Q9UJT1 453 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 HSBP1L1C9JCN9 74 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 E9PQ18 207 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms