RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 PF4P02776 101 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 IFNA6P05013 189 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
HDDC2-209ENST00000609477 EGR2P11161 476 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-209ENST00000609477 UCP3P55916 312 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 NDPQ00604 133 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 ZNF818PQ6ZRF7 136 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 MMD2Q8IY49 270 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 ARRDC1Q8N5I2 433 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 OR52I2Q8NH67 350 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 MCFD2Q8NI22 146 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 ABHD5Q8WTS1 349 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 C6orf62Q9GZU0 229 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-209ENST00000609477 RBM38Q9H0Z9 239 aaKnown RBP11.17□□□□□ -0.62
HDDC2-209ENST00000609477 SLA2Q9H6Q3 261 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 FAM212BQ9NTI7 297 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-209ENST00000609477 WSB1Q9Y6I7 421 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 NUDT19A8MXV4 375 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 H3BUA1 57 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 GPR31O00270 319 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 OR2A4O95047 310 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
HDDC2-209ENST00000609477 HPRT1P00492 218 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 FGF2P09038 288 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 MAS1LP35410 378 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 MYCNOSP40205 109 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 RAB9AP51151 201 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 BRWD1-AS2P59051 145 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 TAS2R31P59538 309 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 TAS2R19P59542 299 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 PRSS8Q16651 343 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 RNASE10Q5GAN6 216 aaKnown RBP11.16□□□□□ -0.62
HDDC2-209ENST00000609477 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 UNQ5815/PRO19632Q6UWF5 114 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 SPAG16Q8N0X2 631 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 TMEM229BQ8NBD8 167 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 SMIM4Q8WVI0 70 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 RHOVQ96L33 236 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 OR2A7Q96R45 310 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
HDDC2-209ENST00000609477 A0A1W2PN81 502 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.62
HDDC2-209ENST00000609477 TNFSF12O43508 249 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 ACTL6BO94805 426 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 CD74P04233 296 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
HDDC2-209ENST00000609477 CHRNA7P36544 502 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 RUNX1Q01196 453 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 IL18Q14116 193 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 POU2AF1Q16633 256 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 CADM3Q8N126 398 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 LFNGQ8NES3 379 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 OR4A5Q8NH83 315 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 ZNF486Q96H40 463 aaPredicted RBP11.15□□□□□ -0.62
HDDC2-209ENST00000609477 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 PLEKHA2Q9HB19 425 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
HDDC2-209ENST00000609477 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 GSTZ1O43708 216 aaPredicted RBP11.14□□□□□ -0.63
HDDC2-209ENST00000609477 PGLYRP1O75594 196 aaPredicted RBP11.14□□□□□ -0.63
HDDC2-209ENST00000609477 KBTBD11O94819 623 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 CD3DP04234 171 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 NQO2P16083 231 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 CD33P20138 364 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 F2RP25116 425 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 TNFSF8P32971 234 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
HDDC2-209ENST00000609477 PJVKQ0ZLH3 352 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 MEF2DQ14814 521 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 MRGPRG-AS1Q2M3A8 158 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 AADACL3Q5VUY0 350 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 PUSL1Q8N0Z8 303 aaKnown RBP11.14□□□□□ -0.63
HDDC2-209ENST00000609477 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
HDDC2-209ENST00000609477 SPIN2AQ99865 258 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 SPIN2BQ9BPZ2 258 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 SOSTQ9BQB4 213 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 FXYD6Q9H0Q3 95 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
HDDC2-209ENST00000609477 FABP12A6NFH5 140 aa11.13□□□□□ -0.63
HDDC2-209ENST00000609477 SOX15O60248 233 aa11.13□□□□□ -0.63
HDDC2-209ENST00000609477 RAMP3O60896 148 aa11.13□□□□□ -0.63
HDDC2-209ENST00000609477 PTBP1P26599 531 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■□□ 17.1
HDDC2-209ENST00000609477 S100A5P33763 92 aa11.13□□□□□ -0.63
HDDC2-209ENST00000609477 ECI1P42126 302 aa11.13□□□□□ -0.63
HDDC2-209ENST00000609477 GNB1P62873 340 aa11.13□□□□□ -0.63
HDDC2-209ENST00000609477 KIAA0141Q14154 515 aaPredicted RBP11.13□□□□□ -0.63
HDDC2-209ENST00000609477 TNXAQ16473 311 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms