RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 PRUNE2Q8WUY3 3088 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 IFNL4K9M1U5 179 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 TREML4Q6UXN2 200 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 OCC1Q8TAD7 63 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 UHRF2Q96PU4 802 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 GGTLC1Q9BX51 225 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 TP53TG3Q9ULZ0 132 aa18.63■□□□□ 0.57
SHANK2-220ENST00000608988 TRGV10A0A0A0MS01 117 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 AREGP15514 252 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 LGALS4P56470 323 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 GCSAMLQ5JQS6 135 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 TCF23Q7RTU1 214 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 OR5AU1Q8NGC0 362 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 GOLT1BQ9Y3E0 138 aa18.62■□□□□ 0.57
SHANK2-220ENST00000608988 ZNF407Q9C0G0 2248 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 LINC00473A8K010 186 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 PRSS46E5RG02 174 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 MT-ND6P03923 174 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 MAGEA5P43359 124 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 RPS16P62249 146 aaKnown RBP18.61■□□□□ 0.57
SHANK2-220ENST00000608988 TMEM251Q8N6I4 163 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 COQ2Q96H96 371 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 RBM14Q96PK6 669 aaKnown RBP18.61■□□□□ 0.57
SHANK2-220ENST00000608988 MGST2Q99735 147 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 TMEM208Q9BTX3 173 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 VAMP8Q9BV40 100 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 GNB1LQ9BYB4 327 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 AURKAIP1Q9NWT8 199 aaPredicted RBP18.61■□□□□ 0.57
SHANK2-220ENST00000608988 PI4KAP42356 2102 aa18.61■□□□□ 0.57
SHANK2-220ENST00000608988 SCO2A0A1W2PP80 73 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 MMP23AO75900 390 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 CFIP05156 583 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 DEFA4P12838 97 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 VDAC2P45880 294 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-220ENST00000608988 MYPOPQ86VE0 399 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-220ENST00000608988 HLA-CQ95604 372 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 OR2J1Q9GZK6 312 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 PATZ1Q9HBE1 687 aaKnown RBP18.6■□□□□ 0.57
SHANK2-220ENST00000608988 LOXL2Q9Y4K0 774 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 A0A1B0GUS0 222 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 FAM166BA8MTA8 275 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 SERF1AO75920 110 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 CER1O95813 267 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 OR9G9P0C7N8 305 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 GCHFRP30047 84 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 LINC00310P59036 64 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 RHOBP62745 196 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 RPEL1Q2QD12 228 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 PEAR1Q5VY43 1037 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-220ENST00000608988 WDR73Q6P4I2 378 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 OR4B1Q8NGF8 309 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 OR1L6Q8NGR2 347 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 OR4A16Q8NH70 328 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 HSPB9Q9BQS6 159 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 ESPL1Q14674 2120 aa18.6■□□□□ 0.57
SHANK2-220ENST00000608988 SPINT2O43291 252 aa18.59■□□□□ 0.57
SHANK2-220ENST00000608988 GRPP07492 148 aa18.59■□□□□ 0.57
SHANK2-220ENST00000608988 OR10J4P0C629 311 aa18.59■□□□□ 0.57
SHANK2-220ENST00000608988 AESQ08117 197 aa18.59■□□□□ 0.57
SHANK2-220ENST00000608988 COLQQ9Y215 455 aaPredicted RBP18.59■□□□□ 0.57
SHANK2-220ENST00000608988 SIT1Q9Y3P8 196 aa18.59■□□□□ 0.57
SHANK2-220ENST00000608988 SAA2-SAA4A0A096LPE2 208 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 TRGV8A0A0C4DH27 118 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 GRIFINA4D1Z8 144 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 PGPEP1LA6NFU8 196 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 SFTPCP11686 197 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 CBLN1P23435 193 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 KIR2DS2P43631 304 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 GABRA2P47869 451 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 SPINK9Q5DT21 86 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 PRAMEF5Q5TYX0 476 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 PRAMEF6Q5VXH4 476 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 ACP7Q6ZNF0 438 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 MRGPRDQ8TDS7 321 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 CXXC4Q9H2H0 198 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 MS4A5Q9H3V2 200 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 NPVFQ9HCQ7 196 aa18.58■□□□□ 0.57
SHANK2-220ENST00000608988 LSM4Q9Y4Z0 139 aaKnown RBP18.58■□□□□ 0.57
SHANK2-220ENST00000608988 PCSK5Q92824 1860 aa18.58■□□□□ 0.56
SHANK2-220ENST00000608988 DUTP33316 252 aaKnown RBP18.58■□□□□ 0.56
SHANK2-220ENST00000608988 CEBPDP49716 269 aaPredicted RBP18.58■□□□□ 0.56
SHANK2-220ENST00000608988 ERVK-16P61578 105 aa18.58■□□□□ 0.56
SHANK2-220ENST00000608988 BAGE3Q86Y29 109 aa18.58■□□□□ 0.56
SHANK2-220ENST00000608988 BAGE2Q86Y30 109 aa18.58■□□□□ 0.56
SHANK2-220ENST00000608988 SLC25A40Q8TBP6 338 aa18.58■□□□□ 0.56
SHANK2-220ENST00000608988 HEYLQ9NQ87 328 aaPredicted RBP18.58■□□□□ 0.56
SHANK2-220ENST00000608988 YTHDF2Q9Y5A9 579 aaKnown RBP18.58■□□□□ 0.56
SHANK2-220ENST00000608988 ARHGAP21Q5T5U3 1957 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 FNDC10F2Z333 226 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 FOXF2Q12947 444 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 RAB31Q13636 194 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 ZNF586Q9NXT0 402 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 PSG11Q9UQ72 335 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 FREM1Q5H8C1 2179 aa18.57■□□□□ 0.56
SHANK2-220ENST00000608988 FCN1O00602 326 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 IRF2P14316 349 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 BRS3P32247 399 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 GPR12P47775 334 aa18.56■□□□□ 0.56
SHANK2-220ENST00000608988 RPL31P62899 125 aaKnown RBP18.56■□□□□ 0.56
SHANK2-220ENST00000608988 OR10J3Q5JRS4 329 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms