RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 PF4P02776 101 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 IFNA6P05013 189 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
HDDC2-206ENST00000608461 EGR2P11161 476 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-206ENST00000608461 UCP3P55916 312 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 NDPQ00604 133 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 ZNF818PQ6ZRF7 136 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 MMD2Q8IY49 270 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 ARRDC1Q8N5I2 433 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 OR52I2Q8NH67 350 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 MCFD2Q8NI22 146 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 ABHD5Q8WTS1 349 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 C6orf62Q9GZU0 229 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-206ENST00000608461 RBM38Q9H0Z9 239 aaKnown RBP11.17□□□□□ -0.62
HDDC2-206ENST00000608461 SLA2Q9H6Q3 261 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 FAM212BQ9NTI7 297 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-206ENST00000608461 WSB1Q9Y6I7 421 aa11.17□□□□□ -0.62
HDDC2-206ENST00000608461 NUDT19A8MXV4 375 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 H3BUA1 57 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 GPR31O00270 319 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 OR2A4O95047 310 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
HDDC2-206ENST00000608461 HPRT1P00492 218 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 FGF2P09038 288 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 MAS1LP35410 378 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 MYCNOSP40205 109 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 RAB9AP51151 201 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 BRWD1-AS2P59051 145 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 TAS2R31P59538 309 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 TAS2R19P59542 299 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 PRSS8Q16651 343 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 RNASE10Q5GAN6 216 aaKnown RBP11.16□□□□□ -0.62
HDDC2-206ENST00000608461 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 UNQ5815/PRO19632Q6UWF5 114 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 SPAG16Q8N0X2 631 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 TMEM229BQ8NBD8 167 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 SMIM4Q8WVI0 70 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 RHOVQ96L33 236 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 OR2A7Q96R45 310 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
HDDC2-206ENST00000608461 A0A1W2PN81 502 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.62
HDDC2-206ENST00000608461 TNFSF12O43508 249 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 ACTL6BO94805 426 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 CD74P04233 296 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
HDDC2-206ENST00000608461 CHRNA7P36544 502 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 RUNX1Q01196 453 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 IL18Q14116 193 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 POU2AF1Q16633 256 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 CADM3Q8N126 398 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 LFNGQ8NES3 379 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 OR4A5Q8NH83 315 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 ZNF486Q96H40 463 aaPredicted RBP11.15□□□□□ -0.62
HDDC2-206ENST00000608461 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 PLEKHA2Q9HB19 425 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
HDDC2-206ENST00000608461 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 GSTZ1O43708 216 aaPredicted RBP11.14□□□□□ -0.63
HDDC2-206ENST00000608461 PGLYRP1O75594 196 aaPredicted RBP11.14□□□□□ -0.63
HDDC2-206ENST00000608461 KBTBD11O94819 623 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 CD3DP04234 171 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 NQO2P16083 231 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 CD33P20138 364 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 F2RP25116 425 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 TNFSF8P32971 234 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
HDDC2-206ENST00000608461 PJVKQ0ZLH3 352 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 MEF2DQ14814 521 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 MRGPRG-AS1Q2M3A8 158 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 AADACL3Q5VUY0 350 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 PUSL1Q8N0Z8 303 aaKnown RBP11.14□□□□□ -0.63
HDDC2-206ENST00000608461 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
HDDC2-206ENST00000608461 SPIN2AQ99865 258 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 SPIN2BQ9BPZ2 258 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 SOSTQ9BQB4 213 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 FXYD6Q9H0Q3 95 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
HDDC2-206ENST00000608461 FABP12A6NFH5 140 aa11.13□□□□□ -0.63
HDDC2-206ENST00000608461 SOX15O60248 233 aa11.13□□□□□ -0.63
HDDC2-206ENST00000608461 RAMP3O60896 148 aa11.13□□□□□ -0.63
HDDC2-206ENST00000608461 PTBP1P26599 531 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■□□ 17.1
HDDC2-206ENST00000608461 S100A5P33763 92 aa11.13□□□□□ -0.63
HDDC2-206ENST00000608461 ECI1P42126 302 aa11.13□□□□□ -0.63
HDDC2-206ENST00000608461 GNB1P62873 340 aa11.13□□□□□ -0.63
HDDC2-206ENST00000608461 KIAA0141Q14154 515 aaPredicted RBP11.13□□□□□ -0.63
HDDC2-206ENST00000608461 TNXAQ16473 311 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms