RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SLC25A42Q86VD7 318 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 OR10R2Q8NGX6 335 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
CTSA-216ENST00000607212 SPIN2AQ99865 258 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 SPIN2BQ9BPZ2 258 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 THAP7Q9BT49 309 aaPredicted RBP11.26□□□□□ -0.61
CTSA-216ENST00000607212 WFDC10AQ9H1F0 79 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
CTSA-216ENST00000607212 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 SACSQ9NZJ4 4579 aa11.26□□□□□ -0.61
CTSA-216ENST00000607212 METTL21EPA6NDL7 271 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
CTSA-216ENST00000607212 MYL9P24844 172 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 FABP5Q01469 135 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 MLLT11Q13015 90 aaPredicted RBP11.25□□□□□ -0.61
CTSA-216ENST00000607212 IRF3Q14653 427 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 CDK10Q15131 360 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 KCTD9Q7L273 389 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 LAX1Q8IWV1 398 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 MMD2Q8IY49 270 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
CTSA-216ENST00000607212 FYTTD1Q96QD9 318 aaKnown RBP11.25□□□□□ -0.61
CTSA-216ENST00000607212 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
CTSA-216ENST00000607212 KCNK7Q9Y2U2 307 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 BIRC6Q9NR09 4857 aa11.25□□□□□ -0.61
CTSA-216ENST00000607212 EPPK1P58107 5090 aaKnown RBP11.24□□□□□ -0.61
CTSA-216ENST00000607212 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.24□□□□□ -0.61
CTSA-216ENST00000607212 LINC00473A8K010 186 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 GGCTO75223 188 aaKnown RBP11.24□□□□□ -0.61
CTSA-216ENST00000607212 IGHV3-23P01764 117 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 HLA-AP01891 365 aaKnown RBP11.24□□□□□ -0.61
CTSA-216ENST00000607212 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
CTSA-216ENST00000607212 ZNF45Q02386 682 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 SLC16A13Q7RTY0 426 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 CENPOQ9BU64 300 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 FBXL7Q9UJT9 491 aa11.24□□□□□ -0.61
CTSA-216ENST00000607212 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 HMX3A6NHT5 357 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 MFNGO00587 321 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 OR2C1O95371 312 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 DIRAS3O95661 229 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 FOLR2P14207 255 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 CD36P16671 472 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 MAP2K4P45985 399 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 OR10A3P58181 314 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 DEFB114Q30KQ6 69 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 FAM209BQ5JX69 171 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 H1FOOQ8IZA3 346 aaPredicted RBP11.23□□□□□ -0.61
CTSA-216ENST00000607212 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 DDB2Q92466 427 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 WDR89Q96FK6 387 aaPredicted RBP11.23□□□□□ -0.61
CTSA-216ENST00000607212 MGLLQ99685 303 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 ST6GALNAC5Q9BVH7 336 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 S4R3C0 116 aa11.23□□□□□ -0.61
CTSA-216ENST00000607212 RBMY1BA6NDE4 496 aaKnown RBP11.22□□□□□ -0.61
CTSA-216ENST00000607212 RBMY1EA6NEQ0 496 aaKnown RBP11.22□□□□□ -0.61
CTSA-216ENST00000607212 ZNF785A8K8V0 405 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 RBMY1DP0C7P1 496 aaKnown RBP11.22□□□□□ -0.61
CTSA-216ENST00000607212 EDN2P20800 178 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 NFYAP23511 347 aaPredicted RBP11.22□□□□□ -0.61
CTSA-216ENST00000607212 CRHBPP24387 322 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 ARL3P36405 182 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
CTSA-216ENST00000607212 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 VKORC1L1Q8N0U8 176 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 OR52B4Q8NGK2 314 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 OR51E2Q9H255 320 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
CTSA-216ENST00000607212 ZNF257Q9Y2Q1 563 aa11.22□□□□□ -0.61
CTSA-216ENST00000607212 TRBV9A0A0B4J1U6 114 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 RAB27BO00194 218 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 DEFA4P12838 97 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 RAB3BP20337 219 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 RAB6AP20340 208 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 KIR2DS2P43631 304 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.61
CTSA-216ENST00000607212 ARL6IP1Q15041 203 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 ZNF57Q68EA5 555 aaPredicted RBP11.21□□□□□ -0.61
CTSA-216ENST00000607212 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 OR4S2Q8NH73 311 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 VSTM2AQ8TAG5 236 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 CACNG8Q8WXS5 425 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 SPATA2Q9UM82 520 aa11.21□□□□□ -0.61
CTSA-216ENST00000607212 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.62
CTSA-216ENST00000607212 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 SMIM30A4D0T7 59 aa11.2□□□□□ -0.62
CTSA-216ENST00000607212 IFITM5A6NNB3 132 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms