RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
LINC00240-203ENST00000606878 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
LINC00240-203ENST00000606878 BCL7BQ9BQE9 202 aa12.91□□□□□ -0.34
LINC00240-203ENST00000606878 MCRIP2Q9BUT9 160 aaKnown RBP12.91□□□□□ -0.34
LINC00240-203ENST00000606878 CMYA5Q8N3K9 4069 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 TNFSF12O43508 249 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 WIPF1O43516 503 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 SOX15O60248 233 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 CREBL2O60519 120 aaPredicted RBP12.9□□□□□ -0.34
LINC00240-203ENST00000606878 ACTL6BO94805 426 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 TPPPO94811 219 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 KIR2DS2P43631 304 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 SPCS2Q15005 226 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
LINC00240-203ENST00000606878 OR1N2Q8NGR9 330 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 AIFM2Q9BRQ8 373 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 ZNF2Q9BSG1 426 aaPredicted RBP12.9□□□□□ -0.34
LINC00240-203ENST00000606878 GPR61Q9BZJ8 451 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 EXTL2Q9UBQ6 330 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 ADAM30Q9UKF2 790 aa12.9□□□□□ -0.34
LINC00240-203ENST00000606878 NOL3O60936 208 aaKnown RBP12.89□□□□□ -0.35
LINC00240-203ENST00000606878 HRASP01112 189 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 RAB25P57735 213 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 TSPAN5P62079 268 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 CATR1Q13166 79 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 TMEM17Q86X19 198 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 OR11H1Q8NG94 326 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 MS4A10Q96PG2 267 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 GPHA2Q96T91 129 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 SLA2Q9H6Q3 261 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 ZNF355PQ9NSJ1 428 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 TNCP24821 2201 aa12.89□□□□□ -0.35
LINC00240-203ENST00000606878 MSGN1A6NI15 193 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 RGS5O15539 181 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
LINC00240-203ENST00000606878 GNRHRP30968 328 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 RCVRNP35243 200 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 HRH1P35367 487 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 BRWD1-AS2P59051 145 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 SSBP2P81877 361 aaPredicted RBP12.88□□□□□ -0.35
LINC00240-203ENST00000606878 RUNX1Q01196 453 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 TNXAQ16473 311 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 VSTM2AQ8TAG5 236 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 DPF1Q92782 380 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 MOB3AQ96BX8 217 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 OR5B12Q96R08 314 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 PHB2Q99623 299 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 SCOCQ9UIL1 159 aa12.88□□□□□ -0.35
LINC00240-203ENST00000606878 I3L521 148 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 CTDSP2O14595 271 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 RBFOX2O43251 390 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC00240-203ENST00000606878 OR2A4O95047 310 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 TRGV3P03979 118 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 MRGPRG-AS1Q2M3A8 158 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 FOXB2Q5VYV0 432 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 LPCAT3Q6P1A2 487 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 ZNF818PQ6ZRF7 136 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 CMTM1Q8IZ96 169 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 POC5Q8NA72 575 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 OR2A7Q96R45 310 aa12.87□□□□□ -0.35
LINC00240-203ENST00000606878 ZNF430Q9H8G1 570 aaPredicted RBP12.87□□□□□ -0.35
LINC00240-203ENST00000606878 H3BUA1 57 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 TPPP2P59282 170 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 FCAMRQ8WWV6 532 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 SRSF12Q8WXF0 261 aaKnown RBP12.86□□□□□ -0.35
LINC00240-203ENST00000606878 RHOVQ96L33 236 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
LINC00240-203ENST00000606878 A0A0G2JLM5 398 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 MPPED1O15442 326 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 PGLYRP1O75594 196 aaPredicted RBP12.85□□□□□ -0.35
LINC00240-203ENST00000606878 HPRT1P00492 218 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 PRB2P02812 416 aaPredicted RBP12.85□□□□□ -0.35
LINC00240-203ENST00000606878 OR8U8P0C7N1 319 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 ZNF616Q08AN1 781 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 PUSL1Q8N0Z8 303 aaKnown RBP12.85□□□□□ -0.35
LINC00240-203ENST00000606878 OR51H1Q8NH63 302 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 OR52I2Q8NH67 350 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 TMEM167AQ8TBQ9 72 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 DYNC2LI1Q8TCX1 351 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 MIXL1Q9H2W2 232 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 KLK11Q9UBX7 282 aa12.85□□□□□ -0.35
LINC00240-203ENST00000606878 C13orf42A0A1B0GVH6 325 aa12.84□□□□□ -0.35
LINC00240-203ENST00000606878 GPR31O00270 319 aa12.84□□□□□ -0.35
LINC00240-203ENST00000606878 RAMP3O60896 148 aa12.84□□□□□ -0.35
LINC00240-203ENST00000606878 BRI3O95415 125 aa12.84□□□□□ -0.35
LINC00240-203ENST00000606878 IFNA6P05013 189 aa12.84□□□□□ -0.35
LINC00240-203ENST00000606878 S100GP29377 79 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms