RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ZNF561Q8N587 486 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 OR10P1Q8NGE3 313 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 TAF15Q92804 592 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTSA-214ENST00000606788 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
CTSA-214ENST00000606788 WDR61Q9GZS3 305 aaKnown RBP13.09□□□□□ -0.31
CTSA-214ENST00000606788 SLC35B3Q9H1N7 401 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 A0A1B0GWJ7 208 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 RRHO14718 337 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 ACSM6Q6P461 480 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 RHOVQ96L33 236 aa13.09□□□□□ -0.31
CTSA-214ENST00000606788 A0A1W2PPH5 198 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 ERVK-16P61578 105 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 ZNF66Q6ZN08 573 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 C1orf174Q8IYL3 243 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 TANC2Q9HCD6 1990 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 H7C2Y5 167 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 YPEL1O60688 119 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 CFHR2P36980 270 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 ZNF383Q8NA42 475 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 IGFBPL1Q8WX77 278 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 YPEL2Q96QA6 119 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 PRELID3BQ9Y3B1 194 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 MSRB2Q9Y3D2 182 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 KPTNQ9Y664 436 aa13.08□□□□□ -0.32
CTSA-214ENST00000606788 hCG_1809904A0A1W2PP81 198 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 A0A1W2PR64 198 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 A0A1W2PRV1 198 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 TLE4Q04727 773 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 RBPJQ06330 500 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 LRRC75BQ2VPJ9 315 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 FAM122CQ6P4D5 195 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 TMEM14EPQ6UXP3 125 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 IGHV3-72A0A0B4J1Y9 119 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 RAB29O14966 203 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 IFNA4P05014 189 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 CRYBA1P05813 215 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 P0C879 139 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 HOXA1P49639 335 aaPredicted RBP13.07□□□□□ -0.32
CTSA-214ENST00000606788 FAM24BQ8N5W8 94 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 GATA4P43694 442 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 AKR1D1P51857 326 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 ICAM4Q14773 271 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 ZNF674Q2M3X9 581 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 AVPI1Q5T686 147 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 RPP25LQ8N5L8 163 aaKnown RBP13.07□□□□□ -0.32
CTSA-214ENST00000606788 RNASE6Q93091 150 aaKnown RBP13.07□□□□□ -0.32
CTSA-214ENST00000606788 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
CTSA-214ENST00000606788 PPIAL4EA0A075B759 164 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 PPIAL4DF5H284 164 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 F2RL2O00254 374 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 PPIAL4FP0DN26 164 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 FFAR4Q5NUL3 377 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
CTSA-214ENST00000606788 PPIAL4AQ9Y536 164 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 SCAF4O95104 1147 aaKnown RBP13.06□□□□□ -0.32
CTSA-214ENST00000606788 HPRT1P00492 218 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 APELAP0DMC3 54 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 PAX6P26367 422 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 KIAA0141Q14154 515 aaPredicted RBP13.06□□□□□ -0.32
CTSA-214ENST00000606788 HFEQ30201 348 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 LHX4Q969G2 390 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 SLC39A9Q9NUM3 307 aa13.06□□□□□ -0.32
CTSA-214ENST00000606788 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 C15orf62A8K5M9 175 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 C1QTNF9P0C862 333 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 CGB3P0DN86 165 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 CGB7P0DN87 165 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 DHRS7BQ6IAN0 325 aaPredicted RBP13.05□□□□□ -0.32
CTSA-214ENST00000606788 TRAT1Q6PIZ9 186 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 NUP37Q8NFH4 326 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 SSMEM1Q8WWF3 244 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 TMEM106BQ9NUM4 274 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 IDI2-AS1Q9NZ38 188 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 CISD1Q9NZ45 108 aaKnown RBP13.05□□□□□ -0.32
CTSA-214ENST00000606788 ZNF835Q9Y2P0 537 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 IGHV3-48P01763 117 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 DMRTC2Q8IXT2 367 aaPredicted RBP13.05□□□□□ -0.32
CTSA-214ENST00000606788 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 CTSZQ9UBR2 303 aa13.05□□□□□ -0.32
CTSA-214ENST00000606788 TMEM200BQ69YZ2 307 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 OR4A47Q6IF82 309 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 ZNF343Q6P1L6 599 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 FAM222BQ8WU58 562 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 ZCCHC14Q8WYQ9 949 aaKnown RBP13.04□□□□□ -0.32
CTSA-214ENST00000606788 NKX6-3A6NJ46 265 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 SRRM4A7MD48 611 aaKnown RBP13.04□□□□□ -0.32
CTSA-214ENST00000606788 H3BQ15 152 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 DVL1O14640 695 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 NQO2P16083 231 aa13.04□□□□□ -0.32
CTSA-214ENST00000606788 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms