RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 GABRA4P48169 554 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 PPOXP50336 477 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 RBMY1FQ15415 496 aaKnown RBP2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 SLC9A3R2Q15599 337 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 RSPO1Q2MKA7 263 aaPredicted RBP2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 FBXL19-AS1Q494R0 122 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 CCDC153Q494R4 210 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 C1orf195Q5TG92 126 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 TMEM42Q69YG0 159 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 FAAP20Q6NZ36 180 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 CLEC19AQ6UXS0 136 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 COMMD7Q86VX2 200 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 NIT1Q86X76 327 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 CLDN22Q8N7P3 220 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 ZNF485Q8NCK3 441 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 OR4P4Q8NGL7 312 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 STAG3L4Q8TBR4 150 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 FAM57AQ8TBR7 257 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 LCN9Q8WX39 176 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 RERGQ96A58 199 aaPredicted RBP2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 TM4SF18Q96CE8 201 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 SMIM8Q96KF7 97 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 C18orf15Q96N68 181 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 FOPNLQ96NB1 174 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 MRPL57Q9BQC6 102 aaKnown RBP2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 PAXXQ9BUH6 204 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 CHST5Q9GZS9 411 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 GID8Q9NWU2 228 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 TRAPPC4Q9Y296 219 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 DSCAMO60469 2012 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 ARHGAP21Q5T5U3 1957 aa2.8□□□□□ -1.96
IGHV3-29-201ENST00000604817 TGP01266 2768 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 IGHV6-1A0A0B4J1U7 121 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TRAV8-2A0A0B4J237 113 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 A0A1B0GX78 115 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 MANBAO00462 879 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 FFAR1O14842 300 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 CCDC22O60826 627 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SMIM24O75264 130 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SUPT3HO75486 399 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 GCM2O75603 506 aaPredicted RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SUPT7LO94864 414 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 HSPB1P04792 205 aaKnown RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 C8GP07360 202 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 GIPP09681 153 aaPredicted RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SPNP16150 400 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 ALDH3A1P30838 453 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 APLNRP35414 380 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PSMB2P49721 201 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SULT1A1P50225 295 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SULT1A2P50226 295 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TMEM33P57088 247 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TAS2R43P59537 309 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 RPL23P62829 140 aaKnown RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SKP2Q13309 424 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PMVKQ15126 192 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PTGES3Q15185 160 aaKnown RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TSNQ15631 228 aaKnown RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 HIST3H3Q16695 136 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 GSG1Q2KHT4 349 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 KRTAP24-1Q3LI83 254 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 Q499Y3 187 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 CCSMST1Q4G0I0 132 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SFXN4Q6P4A7 337 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TNFAIP8L2Q6P589 184 aaPredicted RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 DHRS4L2Q6PKH6 230 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 SBSNQ6UWP8 590 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 LYPD2Q6UXB3 125 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 ACP7Q6ZNF0 438 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 DGAT2L6Q6ZPD8 337 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PRSS58Q8IYP2 241 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 LRRC25Q8N386 305 aaPredicted RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TBC1D19Q8N5T2 526 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 OR10X1Q8NGY0 326 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 OR6K3Q8NGY3 331 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 OR2V1Q8NHB1 315 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 DYDC1Q8WWB3 177 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 ASB17Q8WXJ9 295 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 MARC2Q969Z3 335 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TAMM41Q96BW9 452 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 KCNS1Q96KK3 526 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 HOPXQ9BPY8 73 aaPredicted RBP2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PLEKHF2Q9H8W4 249 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 PARVBQ9HBI1 364 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 FAM60AQ9NP50 221 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 TAS2R5Q9NYW4 299 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 RAB26Q9ULW5 256 aa2.79□□□□□ -1.96
IGHV3-29-201ENST00000604817 EML6Q6ZMW3 1958 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 IGHV1-45A0A0A0MS14 117 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 GMNCA6NCL1 334 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 PGPA6NDG6 321 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 A8MT66 165 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 EVPLLA8MZ36 301 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 SRRM5B3KS81 715 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 H7C423 109 aa2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 DNASE2O00115 360 aaPredicted RBP2.78□□□□□ -1.96
IGHV3-29-201ENST00000604817 ZNF354AO60765 605 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms