RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 FOXH1O75593 365 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 PGCP20142 388 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ACRV1P26436 265 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 MFGE8Q08431 387 aaPredicted RBP3.97□□□□□ -1.77
LINC01109-201ENST00000603837 PMCHL1Q16048 86 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 SEM1Q6ZVN7 128 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 WDR31Q8NA23 367 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 LINC01555Q8NAE3 123 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 OR5A1Q8NGJ0 315 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 RDH5Q92781 318 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 C8orf44Q96CB5 159 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 GPER1Q99527 375 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 SMIM7Q9BQ49 75 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 NRN1Q9NPD7 142 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 TP53TG3Q9ULZ0 132 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 MUC3AQ02505 3323 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 LTBP2Q14767 1821 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 NUP210LQ5VU65 1888 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 C7orf71A4D174 169 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ZFP92A6NM28 416 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 LRRC30A6NM36 301 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF850A8MQ14 1090 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 VCYO14598 125 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 FGF10O15520 208 aaPredicted RBP3.97□□□□□ -1.77
LINC01109-201ENST00000603837 PSPNO60542 156 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 NTN1O95631 604 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 PVRP15151 417 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF17P17021 662 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 CSRP1P21291 193 aaKnown RBP3.97□□□□□ -1.77
LINC01109-201ENST00000603837 AADACP22760 399 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 THBS3P49746 956 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 GNG4P50150 75 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 CLRN1P58418 232 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 Q499Y3 187 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 C1QL3Q5VWW1 255 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 C9orf57Q5W0N0 161 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 CYP2G1PQ6ZSU1 146 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 PIANPQ8IYJ0 282 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF611Q8N823 705 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 RNF128Q8TEB7 428 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 FAM3DQ96BQ1 224 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 MS4A6AQ9H2W1 248 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 FBXL15Q9H469 300 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 PELI2Q9HAT8 420 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 KCNIP1Q9NZI2 227 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 LHX3Q9UBR4 397 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 CKLFQ9UBR5 152 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 RALYQ9UKM9 306 aaKnown RBP3.97□□□□□ -1.77
LINC01109-201ENST00000603837 IER3IP1Q9Y5U9 82 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 VPS13AQ96RL7 3174 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 ATG2AQ2TAZ0 1938 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 NCOR1O75376 2440 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 TRAV9-2A0A087WT02 112 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 DUXBA0A1W2PPF3 345 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 RIIAD1A6NNX1 92 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 RHODO00212 210 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 RAMP2O60895 175 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 TMEM50AO95807 157 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 BCL2P10415 239 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 ALOX5APP20292 161 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 ATP6V0CP27449 155 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 FABP6P51161 128 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 CLDN6P56747 220 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 RHOBP62745 196 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 MEF2CQ06413 473 aaPredicted RBP3.96□□□□□ -1.77
LINC01109-201ENST00000603837 GGTLC2Q14390 218 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 TRAPPC6BQ86SZ2 158 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 HOGA1Q86XE5 327 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 UMODL1-AS1Q8N2C9 162 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 TMEM52Q8NDY8 209 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 OR2K2Q8NGT1 345 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 C8orf46Q8TAG6 207 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 TMEM230Q96A57 120 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 ZMYND19Q96E35 227 aaPredicted RBP3.96□□□□□ -1.77
LINC01109-201ENST00000603837 RASL11BQ9BPW5 248 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 CXXC4Q9H2H0 198 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 PLEKHF2Q9H8W4 249 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 GPR84Q9NQS5 396 aa3.96□□□□□ -1.77
LINC01109-201ENST00000603837 GOLGA4Q13439 2230 aaKnown RBP3.96□□□□□ -1.77
LINC01109-201ENST00000603837 MYO16Q9Y6X6 1858 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 KRASP01116 189 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 GYPBP06028 91 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 GPX1P07203 203 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 C3orf79P0CE67 100 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 CDAP32320 146 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 SGSHP51688 502 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 PPP1CBP62140 327 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 RPL23P62829 140 aaKnown RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 IHHQ14623 411 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 ZIC1Q15915 447 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 HLA-DQA1Q5Y7H0 255 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 FA2HQ7L5A8 372 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 FAM19A5Q7Z5A7 132 aaPredicted RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 SLC35F2Q8IXU6 374 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 ABHD12Q8N2K0 398 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 OR5H2Q8NGV7 314 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 KLK6Q92876 244 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 NEUROG1Q92886 237 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms