RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 GPX8Q8TED1 209 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 DIRAS2Q96HU8 199 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 SRD5A3Q9H8P0 318 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 RAB9BQ9NP90 201 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 RABL2AQ9UBK7 228 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF230Q9UIE0 474 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-207ENST00000600244 RABL2BQ9UNT1 228 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 IGKV1-6A0A0C4DH72 117 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 SULT1C2O00338 296 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 SPINT2O43291 252 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 CD7P09564 240 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 SCTP09683 121 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 ZP3P21754 424 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 PRSS3P35030 304 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 TALDO1P37837 337 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 NDPQ00604 133 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 LY6G6FQ5SQ64 297 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 UBALD1Q8TB05 177 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 SETD6Q8TBK2 473 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 RITA1Q96K30 269 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 WFDC10AQ9H1F0 79 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 SCPEP1Q9HB40 452 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 RANGRFQ9HD47 186 aaPredicted RBP13.26□□□□□ -0.29
SSBP4-207ENST00000600244 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 MRPS7Q9Y2R9 242 aaKnown RBP13.26□□□□□ -0.29
SSBP4-207ENST00000600244 NUBP2Q9Y5Y2 271 aa13.26□□□□□ -0.29
SSBP4-207ENST00000600244 CTDSPLO15194 276 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 DIRAS3O95661 229 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 NAT1P18440 290 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 ATF4P18848 351 aaPredicted RBP13.25□□□□□ -0.29
SSBP4-207ENST00000600244 ETV6P41212 452 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 CBX5P45973 191 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF137PP52743 207 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 ECSCRQ19T08 205 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 Q3ZCU0 254 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 LINC00299Q6ZSB3 139 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 HOGA1Q86XE5 327 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 OR4A4PQ8NGN8 299 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 C15orf40Q8WUR7 153 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 MAFIPQ8WZ33 124 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 GALMQ96C23 342 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 CABLES2Q9BTV7 478 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 PTTG2Q9NZH5 202 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 JPT1Q9UK76 154 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 V9GYH0 126 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 PKD1P98161 4303 aa13.25□□□□□ -0.29
SSBP4-207ENST00000600244 SDCBPO00560 298 aaPredicted RBP13.24□□□□□ -0.29
SSBP4-207ENST00000600244 FABP7O15540 132 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 TXNL1O43396 289 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 GSTT2BP0CG30 244 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 IL3RAP26951 378 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 S100A5P33763 92 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 PYHIN1Q6K0P9 492 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 LIN54Q6MZP7 749 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 WFDC3Q8IUB2 231 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 SNX29P2Q8IUI4 249 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 SNAPC3Q92966 411 aa13.24□□□□□ -0.29
SSBP4-207ENST00000600244 FABP12A6NFH5 140 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF785A8K8V0 405 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 YPEL1O60688 119 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 EGR2P11161 476 aaPredicted RBP13.23□□□□□ -0.29
SSBP4-207ENST00000600244 ACTBP60709 375 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 GNMTQ14749 295 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 MORN2Q502X0 79 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 STEAP3Q658P3 488 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 PRR18Q8N4B5 295 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 OR52L2PQ8NGH6 319 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 OR2K2Q8NGT1 345 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 PHLDA1Q8WV24 401 aaPredicted RBP13.23□□□□□ -0.29
SSBP4-207ENST00000600244 MS4A10Q96PG2 267 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 YPEL2Q96QA6 119 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 OR2S2Q9NQN1 319 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 SLC2A8Q9NY64 477 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 ANXA10Q9UJ72 324 aa13.23□□□□□ -0.29
SSBP4-207ENST00000600244 TRBV6-7A0A0A0MS04 114 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 IGHV3-43A0A0B4J1X8 118 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 MEIS3P1A6NDR6 274 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 GABARAPH6UMI1 98 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 NDUFB8O95169 186 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 IGHV3-43DP0DP04 118 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 PTBP1P26599 531 aaKnown RBP eCLIP13.22□□□□□ -0.29
SSBP4-207ENST00000600244 SYNJ2BPP57105 145 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 TPPP2P59282 170 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
SSBP4-207ENST00000600244 LSAMPQ13449 338 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF79Q15937 498 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 IGSF11Q5DX21 431 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF660Q6AZW8 331 aaPredicted RBP13.22□□□□□ -0.29
SSBP4-207ENST00000600244 SLC25A48Q6ZT89 311 aaKnown RBP13.22□□□□□ -0.29
SSBP4-207ENST00000600244 LYG2Q86SG7 212 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 OR52I2Q8NH67 350 aa13.22□□□□□ -0.29
SSBP4-207ENST00000600244 MTFP1Q9UDX5 166 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms