RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 H0Y980 276 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 UBE2CO00762 179 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 SSSCA1O60232 199 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 GPR6P46095 362 aaPredicted RBP12.46□□□□□ -0.41
VRK3-218ENST00000600031 PRAMEF5Q5TYX0 476 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 ZNF525Q8N782 197 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 LEAP2Q969E1 77 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 OR2D2Q9H210 308 aa12.46□□□□□ -0.41
VRK3-218ENST00000600031 RBFOX3A6NFN3 312 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 ST8SIA5O15466 376 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.42
VRK3-218ENST00000600031 RAB5AP20339 215 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 MAS1LP35410 378 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 SULT1A1P50225 295 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 ZNF134P52741 427 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 CXorf66Q5JRM2 361 aaPredicted RBP12.46□□□□□ -0.42
VRK3-218ENST00000600031 SOHLH1Q5JUK2 328 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 DRAM1Q8N682 238 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 OR8B3Q8NGG8 313 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 NRGNQ92686 78 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.42
VRK3-218ENST00000600031 C5orf30Q96GV9 206 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 ZNF714Q96N38 554 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 OR8B2Q96RD0 313 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 AGMATQ9BSE5 352 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 RAB9BQ9NP90 201 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 PSG11Q9UQ72 335 aa12.46□□□□□ -0.42
VRK3-218ENST00000600031 SPG11Q96JI7 2443 aa12.45□□□□□ -0.42
VRK3-218ENST00000600031 OR13C7P0DN81 318 aa12.45□□□□□ -0.42
VRK3-218ENST00000600031 WDR25Q64LD2 544 aaPredicted RBP12.45□□□□□ -0.42
VRK3-218ENST00000600031 DPPA3Q6W0C5 159 aa12.45□□□□□ -0.42
VRK3-218ENST00000600031 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
VRK3-218ENST00000600031 C20orf24Q9BUV8 137 aa12.45□□□□□ -0.42
VRK3-218ENST00000600031 KIAA1456Q9P272 454 aa12.45□□□□□ -0.42
VRK3-218ENST00000600031 A0A1W2PPH5 198 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 WRBO00258 174 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 SLC25A6P12236 298 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 OR5C1Q8NGR4 320 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 HIPK2Q9H2X6 1198 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 PATZ1Q9HBE1 687 aaKnown RBP12.44□□□□□ -0.42
VRK3-218ENST00000600031 SLC31A2O15432 143 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 S100A9P06702 114 aaKnown RBP12.44□□□□□ -0.42
VRK3-218ENST00000600031 DYNLT3P51808 116 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 RAB2AP61019 212 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 B2MP61769 119 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 EDARADDQ8WWZ3 215 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 ISOC2Q96AB3 205 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 TCEAL7Q9BRU2 100 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 MAGT1Q9H0U3 335 aa12.44□□□□□ -0.42
VRK3-218ENST00000600031 METTL1Q9UBP6 276 aaKnown RBP12.44□□□□□ -0.42
VRK3-218ENST00000600031 RPUSD1Q9UJJ7 312 aaKnown RBP12.44□□□□□ -0.42
VRK3-218ENST00000600031 TRBV23-1A0A0A0MS06 115 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 HBE1P02100 147 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 F2RP25116 425 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 DLX6P56179 175 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 HEPN1Q6WQI6 88 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 FBN2P35556 2912 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 GPR37O15354 613 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 CHST1O43916 411 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 DFFBO76075 338 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 EIF4EBP1Q13541 118 aaPredicted RBP12.43□□□□□ -0.42
VRK3-218ENST00000600031 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 ODF3L1Q8IXM7 274 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 FAM24BQ8N5W8 94 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 RBMXL1Q96E39 390 aaKnown RBP12.43□□□□□ -0.42
VRK3-218ENST00000600031 ATP5SQ99766 215 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 RARRES2Q99969 163 aa12.43□□□□□ -0.42
VRK3-218ENST00000600031 ARID1AO14497 2285 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
VRK3-218ENST00000600031 A0A1B0GU03 582 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 GNB2P62879 340 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 TMEM30BQ3MIR4 351 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 C1QL4Q86Z23 238 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 C11orf42Q8N5U0 333 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 ZNF439Q8NDP4 499 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 OR10A7Q8NGE5 316 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 ABHD14AQ9BUJ0 271 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 BPESC1Q9GZL8 116 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 IFI27L2Q9H2X8 130 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 PUS1Q9Y606 427 aaKnown RBP eCLIP12.42□□□□□ -0.42
VRK3-218ENST00000600031 CELSR2Q9HCU4 2923 aa12.42□□□□□ -0.42
VRK3-218ENST00000600031 A0A1B0GV50 99 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 ITGB1BP1O14713 200 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 PROP1O75360 226 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 CST7O76096 145 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 TMEM50AO95807 157 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 IFNA17P01571 189 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 HSPB1P04792 205 aaKnown RBP12.41□□□□□ -0.42
VRK3-218ENST00000600031 ARG1P05089 322 aa12.41□□□□□ -0.42
VRK3-218ENST00000600031 SRP19P09132 144 aaKnown RBP12.41□□□□□ -0.42
VRK3-218ENST00000600031 GNG10P50151 68 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms