RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 POMT1Q9Y6A1 747 aa18.85■□□□□ 0.61
SYMPK-212ENST00000598896 SRRM4A7MD48 611 aaKnown RBP18.84■□□□□ 0.61
SYMPK-212ENST00000598896 LEUTXA8MZ59 168 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 ST8SIA3O43173 380 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 OR9G9P0C7N8 305 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 PET100P0DJ07 73 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 C17orf50Q8WW18 174 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 DCUN1D4Q92564 292 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 MAGT1Q9H0U3 335 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 COA4Q9NYJ1 87 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 NSG2Q9Y328 171 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 WASHC3Q9Y3C0 194 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 HILPDAQ9Y5L2 63 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 UBE2E1P51965 193 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 POLR2GP62487 172 aaKnown RBP eCLIP18.84■□□□□ 0.61
SYMPK-212ENST00000598896 TAGLNQ01995 201 aaKnown RBP18.84■□□□□ 0.61
SYMPK-212ENST00000598896 PDPNQ86YL7 162 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 TMEM140Q9NV12 185 aa18.84■□□□□ 0.61
SYMPK-212ENST00000598896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.83■□□□□ 0.611e-7■■■■□ 19.8
SYMPK-212ENST00000598896 RNF222A6NCQ9 220 aa18.83■□□□□ 0.6
SYMPK-212ENST00000598896 TXNL1O43396 289 aa18.83■□□□□ 0.6
SYMPK-212ENST00000598896 RRASP10301 218 aa18.83■□□□□ 0.6
SYMPK-212ENST00000598896 ERVK-16P61578 105 aa18.83■□□□□ 0.6
SYMPK-212ENST00000598896 HIF1ANQ9NWT6 349 aa18.83■□□□□ 0.6
SYMPK-212ENST00000598896 POU2AF1Q16633 256 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 TMEM177Q53S58 311 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 OR4A47Q6IF82 309 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 MOB3BQ86TA1 216 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 DYNAPQ8N1N2 210 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 FLYWCH2Q96CP2 140 aaKnown RBP18.82■□□□□ 0.6
SYMPK-212ENST00000598896 TRAV3A0A0B4J244 114 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 CENPVL3A0A0U1RRI6 287 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 SHOXO15266 292 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 MC5RP33032 325 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 CEACAM3P40198 252 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 AP2S1P53680 142 aaPredicted RBP18.82■□□□□ 0.6
SYMPK-212ENST00000598896 LINC01356Q8N9X3 169 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 OR4C13Q8NGP0 309 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 OSR1Q8TAX0 266 aaPredicted RBP18.82■□□□□ 0.6
SYMPK-212ENST00000598896 RITA1Q96K30 269 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 HARBI1Q96MB7 349 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 MFFQ9GZY8 342 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 C11orf1Q9H5F2 150 aa18.82■□□□□ 0.6
SYMPK-212ENST00000598896 MSGN1A6NI15 193 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 TIMM23O14925 209 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 SSSCA1O60232 199 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 HRASP01112 189 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 RAB13P51153 203 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 OR2B8PP59922 312 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 AJUBAQ96IF1 538 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 ZFP57Q9NU63 452 aa18.81■□□□□ 0.6
SYMPK-212ENST00000598896 PRRC2AP48634 2157 aaKnown RBP18.8■□□□□ 0.6
SYMPK-212ENST00000598896 SSX2Q16385 188 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 MINOS1Q5TGZ0 78 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 PIP4P2Q8N4L2 257 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 WFDC11Q8NEX6 87 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.8■□□□□ 0.6
SYMPK-212ENST00000598896 AUP1Q9Y679 476 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 MINOS1-NBL1R4GNA1 71 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 ZANQ9Y493 2812 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 ZNF469Q96JG9 3925 aaPredicted RBP18.8■□□□□ 0.6
SYMPK-212ENST00000598896 TRAV20A0A0B4J274 112 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 L7N2F9 121 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 RLN2P04090 185 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 SAA4P35542 130 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 LGALS4P56470 323 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 RELBQ01201 579 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 CFHR4Q92496 578 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 C7orf69Q9H7B7 122 aa18.8■□□□□ 0.6
SYMPK-212ENST00000598896 FAM90A9PA6NNJ1 464 aa18.79■□□□□ 0.6
SYMPK-212ENST00000598896 TMEM50AO95807 157 aa18.79■□□□□ 0.6
SYMPK-212ENST00000598896 SAA1P0DJI8 122 aaPredicted RBP18.79■□□□□ 0.6
SYMPK-212ENST00000598896 QTRT1Q9BXR0 403 aaKnown RBP18.79■□□□□ 0.6
SYMPK-212ENST00000598896 MS4A7Q9GZW8 240 aaPredicted RBP18.79■□□□□ 0.6
SYMPK-212ENST00000598896 TRAV40A0A0B4J280 105 aa18.78■□□□□ 0.6
SYMPK-212ENST00000598896 IGLV2-23P01705 113 aa18.78■□□□□ 0.6
SYMPK-212ENST00000598896 IL6RP08887 468 aaPredicted RBP18.78■□□□□ 0.6
SYMPK-212ENST00000598896 TNFRSF9Q07011 255 aa18.78■□□□□ 0.6
SYMPK-212ENST00000598896 OR8H3Q8N146 312 aa18.78■□□□□ 0.6
SYMPK-212ENST00000598896 HSPB7Q9UBY9 170 aa18.78■□□□□ 0.6
SYMPK-212ENST00000598896 TBL2Q9Y4P3 447 aaKnown RBP18.78■□□□□ 0.6
SYMPK-212ENST00000598896 IGHV3OR16-10A0A075B7F0 116 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 E5RGE8 158 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 CHST1O43916 411 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 RBMXL2O75526 392 aaKnown RBP18.77■□□□□ 0.6
SYMPK-212ENST00000598896 AVPP01185 164 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 IGHV4-31P0DP07 118 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 RPS16P62249 146 aaKnown RBP18.77■□□□□ 0.6
SYMPK-212ENST00000598896 HABP2Q14520 560 aaPredicted RBP18.77■□□□□ 0.6
SYMPK-212ENST00000598896 ZNF345Q14585 488 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 TMEM249Q2WGJ8 235 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 AARDQ4LEZ3 155 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 ACOT7LQ6ZUV0 252 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 INO80EQ8NBZ0 244 aaPredicted RBP18.77■□□□□ 0.6
SYMPK-212ENST00000598896 TET2Q6N021 2002 aaPredicted RBP18.77■□□□□ 0.6
SYMPK-212ENST00000598896 NPFFO15130 113 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 RUSC1-AS1Q66K80 236 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 TMUB2Q71RG4 321 aa18.77■□□□□ 0.6
SYMPK-212ENST00000598896 PUSL1Q8N0Z8 303 aaKnown RBP18.77■□□□□ 0.6
SYMPK-212ENST00000598896 AQP10Q96PS8 301 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms