RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 Q8IYB0 196 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 OR2T10Q8NGZ9 312 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 SGMS2Q8NHU3 365 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 NEIL1Q96FI4 390 aaPredicted RBP10.4□□□□□ -0.75
USHBP1-207ENST00000597928 TUBG2Q9NRH3 451 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 WIPI2Q9Y4P8 454 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 SPTBN4Q9H254 2564 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 MLNRO43193 412 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 AGAP20933 346 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 DLX1P56177 255 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 PRSS8Q16651 343 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 KCNIP4Q6PIL6 250 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 LINC00469Q8N7U9 141 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 SPSB4Q96A44 273 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 NAT8Q9UHE5 227 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 REG1AP05451 166 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 RAB31Q13636 194 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 ZNF645Q8N7E2 425 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 OR8G5Q8NG78 346 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 TMEM45BQ96B21 275 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 GMPPAQ96IJ6 420 aaPredicted RBP10.39□□□□□ -0.75
USHBP1-207ENST00000597928 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 METTL1Q9UBP6 276 aaKnown RBP10.39□□□□□ -0.75
USHBP1-207ENST00000597928 ATG2AQ2TAZ0 1938 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 RRHO14718 337 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 OR9G9P0C7N8 305 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 ARL14EPLP0DKL9 152 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 Q6P435 159 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 ASCL4Q6XD76 172 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 ABHD5Q8WTS1 349 aa10.39□□□□□ -0.75
USHBP1-207ENST00000597928 A0A1B0GV90 55 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 SEC14L6B5MCN3 397 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
USHBP1-207ENST00000597928 OR5I1Q13606 314 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 MLANAQ16655 118 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 LRRC75BQ2VPJ9 315 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 C10orf91Q5T1B1 145 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 ZNF497Q6ZNH5 498 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 MOB3BQ86TA1 216 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 LINC00470Q9BZP3 86 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 TRAV34A0A0B4J273 112 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 RPL29P47914 159 aaKnown RBP10.38□□□□□ -0.75
USHBP1-207ENST00000597928 TNFSF10P50591 281 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 MRPS11P82912 194 aaKnown RBP10.38□□□□□ -0.75
USHBP1-207ENST00000597928 PSG5Q15238 335 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
USHBP1-207ENST00000597928 Q6ZR03 302 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 COLCA1Q6ZS62 124 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 MOB1BQ7L9L4 216 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 FAM216BQ8N7L0 139 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 BLNKQ8WV28 456 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 TAAR6Q96RI8 345 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 TPPP3Q9BW30 176 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 OR51M1Q9H341 326 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 RNF115Q9Y4L5 304 aa10.38□□□□□ -0.75
USHBP1-207ENST00000597928 STUMQ69YW2 141 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 CYB5R2Q6BCY4 276 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 DYNLRB1Q9NP97 96 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 TRAV17A0A0B4J275 112 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 UBE2CO00762 179 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 CDX4O14627 284 aaPredicted RBP10.37□□□□□ -0.75
USHBP1-207ENST00000597928 PMCHP20382 165 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 TNFAIP6P98066 277 aaPredicted RBP10.37□□□□□ -0.75
USHBP1-207ENST00000597928 PLGLAQ15195 96 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 SPRNQ5BIV9 151 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 WDR82Q6UXN9 313 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 BHLHA15Q7RTS1 189 aaPredicted RBP10.37□□□□□ -0.75
USHBP1-207ENST00000597928 EDARADDQ8WWZ3 215 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 ATG101Q9BSB4 218 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 NPCDR1Q9BY65 106 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 PXMP4Q9Y6I8 212 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 NCKAP5O14513 1909 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 KLF3P57682 345 aaPredicted RBP10.37□□□□□ -0.75
USHBP1-207ENST00000597928 KRTDAPP60985 99 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 CTAG1AP78358 180 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 GABRA6Q16445 453 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 ACP7Q6ZNF0 438 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 COQ2Q96H96 371 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 UHRF2Q96PU4 802 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 PKIBQ9C010 78 aa10.37□□□□□ -0.75
USHBP1-207ENST00000597928 IGKV3D-15A0A087WSY6 115 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM157AC9JC47 383 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 SLC31A2O15432 143 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FTH1P19P0C7X4 201 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 IER3P46695 156 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 SPATA31B1PQ5VZV4 182 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 C1QL4Q86Z23 238 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 TGIF2LYQ8IUE0 185 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 OR4X1Q8NH49 305 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A10PA6NDY2 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A18PA6NE21 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A16PA6NEW6 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A20PA6NIJ5 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A7PA6NKC0 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A22PA8MWA6 464 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms