RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CD1BP29016 333 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 LPAR6P43657 344 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 LINC00205P59089 165 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 ERVK-16P61578 105 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 HES1Q14469 280 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 TMEM187Q14656 261 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 Q6ZNX1 250 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 C9orf139Q6ZV77 190 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 ZNF695Q8IW36 515 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 DYNAPQ8N1N2 210 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 C12orf45Q8N5I9 185 aaPredicted RBP9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 OR4C13Q8NGP0 309 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 FLYWCH2Q96CP2 140 aaKnown RBP9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 OR51J1Q9H342 316 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 COMMD9Q9P000 198 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 DNAH1Q9P2D7 4330 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 A0A0B4J293 547 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 A0A0B4J2A0 478 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 SHOXO15266 292 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 RAMP3O60896 148 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 S1PR2O95136 353 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 HPRT1P00492 218 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 HRASP01112 189 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 IGKV1D-33P01593 117 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 IGKV1-33P01594 117 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 FAM106CPP0CH98 169 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 PAX6P26367 422 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 AKR1C2P52895 323 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 LRRC75BQ2VPJ9 315 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 ANKRD55Q3KP44 614 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 TMEM268Q5VZI3 342 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 UXS1Q8NBZ7 420 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 GLYATL2Q8WU03 294 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 MITD1Q8WV92 249 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 C22orf15Q8WYQ4 148 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 CFHR4Q92496 578 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 RBPMSQ93062 196 aaKnown RBP9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 IL22RA2Q969J5 263 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 AJUBAQ96IF1 538 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 HARBI1Q96MB7 349 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 AIFM2Q9BRQ8 373 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 PLEKHA2Q9HB19 425 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 PRR13Q9NZ81 148 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 SHPKQ9UHJ6 478 aa9.66□□□□□ -0.86
SHKBP1-213ENST00000597325 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 DUXBA0A1W2PPF3 345 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 BTBD17A6NE02 478 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 CDS2O95674 445 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 MOSP00540 346 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 IFNA21P01568 189 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 IGKV1-16P04430 117 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 SNRNP70P08621 437 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 TMEM11P17152 192 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 RPS16P62249 146 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 HABP2Q14520 560 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 DEFB112Q30KQ8 113 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 LIN54Q6MZP7 749 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 OR2T10Q8NGZ9 312 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 OSR1Q8TAX0 266 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 R3HDM4Q96D70 268 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 RRNAD1Q96FB5 475 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 TMEM56Q96MV1 263 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 MEGF9Q9H1U4 602 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 MED28Q9H204 178 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 TMEM56-RWDD3S4R434 201 aa9.65□□□□□ -0.86
SHKBP1-213ENST00000597325 HYDINQ4G0P3 5121 aa9.65□□□□□ -0.87
SHKBP1-213ENST00000597325 MDFIC2A0A1B0GVS7 189 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 NQO2P16083 231 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 DYNLT3P51808 116 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 SRSF4Q08170 494 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 AANATQ16613 207 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 ZNF585BQ52M93 769 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 TMEM177Q53S58 311 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 RBMS3Q6XE24 437 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 SELENOHQ8IZQ5 122 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 BCL6BQ8N143 479 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 SLC35G3Q8N808 338 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 LRTM2Q8N967 370 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 SSX3Q99909 188 aa9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 SOX21Q9Y651 276 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-213ENST00000597325 WNK2Q9Y3S1 2297 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 H3BUX3 64 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 KRASP01116 189 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 HOXB5P09067 269 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 CD24P25063 80 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 G6PCP35575 357 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 HNF4GQ14541 408 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 THOC7Q6I9Y2 204 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 THNSL2Q86YJ6 484 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 LHFPL5Q8TAF8 219 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 VSTM2AQ8TAG5 236 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms