RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 OR4C12Q96R67 309 aa13.77□□□□□ -0.21
CHMP2A-203ENST00000597209 PHB2Q99623 299 aa13.77□□□□□ -0.21
CHMP2A-203ENST00000597209 ELOVL1Q9BW60 279 aa13.77□□□□□ -0.21
CHMP2A-203ENST00000597209 AUNIPQ9H7T9 357 aa13.77□□□□□ -0.21
CHMP2A-203ENST00000597209 SMAD5-AS1Q9Y6J3 95 aa13.77□□□□□ -0.21
CHMP2A-203ENST00000597209 OR9G9P0C7N8 305 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 ARPC4P59998 168 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 ZNF66Q6ZN08 573 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 IDO2Q6ZQW0 420 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 MFSD4AQ8N468 514 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 ADAD2Q8NCV1 583 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 WWC2-AS2Q96NR7 200 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 DCUN1D5Q9BTE7 237 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 ZNF430Q9H8G1 570 aaPredicted RBP13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 COA4Q9NYJ1 87 aa13.76□□□□□ -0.21
CHMP2A-203ENST00000597209 GP9P14770 177 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 SPNP16150 400 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 CBX5P45973 191 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 DYRK1AQ13627 763 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 KLF5Q13887 457 aaPredicted RBP13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 GVQW1Q8N7I0 195 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 ZBTB34Q8NCN2 500 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 OR4S2Q8NH73 311 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 VSTM2AQ8TAG5 236 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 ACOT12Q8WYK0 555 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 SPIN2AQ99865 258 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 SPIN2BQ9BPZ2 258 aa13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 PEF1Q9UBV8 284 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-203ENST00000597209 SORL1Q92673 2214 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 A0A087WXM4 84 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 ACTL6BO94805 426 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 BRWD1-AS2P59051 145 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 TTC9CQ8N5M4 171 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 TCTEX1D2Q8WW35 142 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 YIPF6Q96EC8 236 aa13.74□□□□□ -0.21
CHMP2A-203ENST00000597209 TRBV9A0A0B4J1U6 114 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 ANKRD34BA5PLL1 514 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 FAM223BA6NKX1 122 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 MPPED1O15442 326 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 XRCC3O43542 346 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 AIREO43918 545 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 OR2A4O95047 310 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 FCGR2CP31995 323 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 MAS1LP35410 378 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 KIR2DS2P43631 304 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 SLC25A42Q86VD7 318 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 FAM223AQ8IWN6 122 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 PUSL1Q8N0Z8 303 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 TSPAN14Q8NG11 270 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 TMEM167AQ8TBQ9 72 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 GIMAP1Q8WWP7 306 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 S100A16Q96FQ6 103 aaKnown RBP13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 OR2A7Q96R45 310 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 U3KQK5 164 aa13.73□□□□□ -0.21
CHMP2A-203ENST00000597209 TNCP24821 2201 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 KBTBD11O94819 623 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 TNFAIP8O95379 198 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 PPYP01298 95 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 APELAP0DMC3 54 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 RPS19P39019 145 aaKnown RBP13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 TATDN3Q17R31 274 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 OR2B11Q5JQS5 317 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 OR5AP2Q8NGF4 316 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 CCL28Q9NRJ3 127 aa13.72□□□□□ -0.21
CHMP2A-203ENST00000597209 RBFOX2O43251 390 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 RBMXL2O75526 392 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 HRASP01112 189 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 FAM209BQ5JX69 171 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 UBE2NLQ5JXB2 153 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 OR13F1Q8NGS4 319 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 SNAPC3Q92966 411 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 TAS2R8Q9NYW2 309 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 SIGLEC8Q9NYZ4 499 aa13.71□□□□□ -0.21
CHMP2A-203ENST00000597209 PTHLHP12272 177 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 TGFBR1P36897 503 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 RHOGP84095 191 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 DEFA5Q01523 94 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 ZNF45Q02386 682 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 C10orf55Q5SWW7 151 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 IL34Q6ZMJ4 242 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 ASCL2Q99929 193 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 AKIP1Q9NQ31 210 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
CHMP2A-203ENST00000597209 TRIM64CA6NLI5 447 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 TEX22C9J3V5 150 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 RPL27AP46776 148 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 SYNJ2BPP57105 145 aa13.69□□□□□ -0.22
CHMP2A-203ENST00000597209 ATP5G2Q06055 141 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms