RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 USMG5Q96IX5 58 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 B9D2Q9BPU9 175 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 TINAGL1Q9GZM7 467 aaPredicted RBP8.11□□□□□ -1.11
CCDC9-203ENST00000596938 RANGRFQ9HD47 186 aaPredicted RBP8.11□□□□□ -1.11
CCDC9-203ENST00000596938 ZNF355PQ9NSJ1 428 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 LSM4Q9Y4Z0 139 aaKnown RBP8.11□□□□□ -1.11
CCDC9-203ENST00000596938 COL7A1Q02388 2944 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 ACTL6BO94805 426 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 PPYP01298 95 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SAA1P0DJI8 122 aaPredicted RBP8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SLURP1P55000 103 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 LSM3P62310 102 aaKnown RBP8.1□□□□□ -1.11
CCDC9-203ENST00000596938 UBE2NLQ5JXB2 153 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 ACSM6Q6P461 480 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 DHRS11Q6UWP2 260 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 IDO2Q6ZQW0 420 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 MMD2Q8IY49 270 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 OR4S2Q8NH73 311 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 VSTM2AQ8TAG5 236 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 TCTEX1D2Q8WW35 142 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SRSF12Q8WXF0 261 aaKnown RBP8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SNAPC3Q92966 411 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SLC25A46Q96AG3 418 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 CMTM3Q96MX0 182 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SPIN2AQ99865 258 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 SPIN2BQ9BPZ2 258 aa8.1□□□□□ -1.11
CCDC9-203ENST00000596938 ZNF430Q9H8G1 570 aaPredicted RBP8.1□□□□□ -1.11
CCDC9-203ENST00000596938 ZNF256Q9Y2P7 627 aaPredicted RBP8.1□□□□□ -1.11
CCDC9-203ENST00000596938 OR2A4O95047 310 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 OR9G9P0C7N8 305 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 PTHLHP12272 177 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 NAT1P18440 290 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 ZP3P21754 424 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 KIR2DS2P43631 304 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 CD69Q07108 199 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 KLF5Q13887 457 aaPredicted RBP8.09□□□□□ -1.11
CCDC9-203ENST00000596938 TNXAQ16473 311 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 ZNF343Q6P1L6 599 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 PUSL1Q8N0Z8 303 aaKnown RBP8.09□□□□□ -1.11
CCDC9-203ENST00000596938 TTC9CQ8N5M4 171 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 SAMD12Q8N8I0 201 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 ADAD2Q8NCV1 583 aaKnown RBP8.09□□□□□ -1.11
CCDC9-203ENST00000596938 OR13F1Q8NGS4 319 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 TMEM167AQ8TBQ9 72 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 ACOT12Q8WYK0 555 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 OR2A7Q96R45 310 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 PHB2Q99623 299 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 AIFM2Q9BRQ8 373 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 CCL28Q9NRJ3 127 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 TAS2R8Q9NYW2 309 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 ANAPC10Q9UM13 185 aa8.09□□□□□ -1.11
CCDC9-203ENST00000596938 TRBV9A0A0B4J1U6 114 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 RBFOX2O43251 390 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCDC9-203ENST00000596938 SAP30O75446 220 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 HRASP01112 189 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 NHLRC4P0CG21 123 aaPredicted RBP8.08□□□□□ -1.12
CCDC9-203ENST00000596938 MAS1LP35410 378 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 TAS2R20P59543 309 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 DYRK1AQ13627 763 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 OR2B11Q5JQS5 317 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 VAX1Q5SQQ9 334 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 TMEM69Q5SWH9 247 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 SLC25A42Q86VD7 318 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 SECTM1Q8WVN6 248 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 BORCS5Q969J3 196 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 OR4C12Q96R67 309 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 PRR25Q96S07 402 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 ELOVL1Q9BW60 279 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 SLC5A7Q9GZV3 580 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 IFT46Q9NQC8 304 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 COA4Q9NYJ1 87 aa8.08□□□□□ -1.12
CCDC9-203ENST00000596938 PEF1Q9UBV8 284 aaKnown RBP8.08□□□□□ -1.12
CCDC9-203ENST00000596938 SMIM31A0A1B0GVY4 71 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 ANKRD34BA5PLL1 514 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 MPPED1O15442 326 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 RBMXL2O75526 392 aaKnown RBP8.07□□□□□ -1.12
CCDC9-203ENST00000596938 KBTBD11O94819 623 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 APOA1P02647 267 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 FCER2P06734 321 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 APELAP0DMC3 54 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 GNRHRP30968 328 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 PRSS3P35030 304 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 VBP1P61758 197 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 NCS1P62166 190 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 LYSMD2Q8IV50 215 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 OR6Q1Q8NGQ2 317 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 OR4A5Q8NH83 315 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 CD300LFQ8TDQ1 290 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 ADAM30Q9UKF2 790 aa8.07□□□□□ -1.12
CCDC9-203ENST00000596938 MEIS3P1A6NDR6 274 aa8.06□□□□□ -1.12
CCDC9-203ENST00000596938 TEX22C9J3V5 150 aa8.06□□□□□ -1.12
CCDC9-203ENST00000596938 SULT1C2O00338 296 aa8.06□□□□□ -1.12
CCDC9-203ENST00000596938 TNFSF12O43508 249 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms