RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FAAP20Q6NZ36 180 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 STEAP1BQ6NZ63 245 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 UNQ5815/PRO19632Q6UWF5 114 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 POC5Q8NA72 575 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 OR4D10Q8NGI6 311 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 OSR1Q8TAX0 266 aaPredicted RBP8.7□□□□□ -1.02
LIG1-211ENST00000596457 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 BORCS5Q969J3 196 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 PHB2Q99623 299 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 NDUFA13Q9P0J0 144 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 RABL2AQ9UBK7 228 aaPredicted RBP8.7□□□□□ -1.02
LIG1-211ENST00000596457 RABL2BQ9UNT1 228 aa8.7□□□□□ -1.02
LIG1-211ENST00000596457 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 ARPC1BO15143 372 aaKnown RBP8.69□□□□□ -1.02
LIG1-211ENST00000596457 CTDSPLO15194 276 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 RAMP3O60896 148 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 PGLYRP1O75594 196 aaPredicted RBP8.69□□□□□ -1.02
LIG1-211ENST00000596457 IGF1P05019 195 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 CRYGBP07316 175 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 SAA1P0DJI8 122 aaPredicted RBP8.69□□□□□ -1.02
LIG1-211ENST00000596457 APELAP0DMC3 54 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 RPA2P15927 270 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 BRWD1-AS2P59051 145 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 UBE2KP61086 200 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 TMEM267Q0VDI3 215 aaPredicted RBP8.69□□□□□ -1.02
LIG1-211ENST00000596457 MSMO1Q15800 293 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 LPCAT3Q6P1A2 487 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 TMEM65Q6PI78 240 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 ZNF562Q6V9R5 426 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 C18orf65Q6ZTR6 163 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 CMTM1Q8IZ96 169 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 COMMD1Q8N668 190 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 TEX45Q8NA69 505 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 KLHL30-AS1Q8NEE0 82 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 LFNGQ8NES3 379 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 CASTOR1Q8WTX7 329 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 ARPC1AQ92747 370 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 ZNF355PQ9NSJ1 428 aa8.69□□□□□ -1.02
LIG1-211ENST00000596457 DISC1C4P0D8 188 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 HRASP01112 189 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 PF4P02776 101 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 ELANEP08246 267 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 AKAIN1P0CW23 69 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 EGR2P11161 476 aaPredicted RBP8.68□□□□□ -1.02
LIG1-211ENST00000596457 PI3P19957 117 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 S100GP29377 79 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 LPAR6P43657 344 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 RPL23AP62750 156 aaKnown RBP8.68□□□□□ -1.02
LIG1-211ENST00000596457 DEFA6Q01524 100 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 SSBP1Q04837 148 aaKnown RBP8.68□□□□□ -1.02
LIG1-211ENST00000596457 FOXE3Q13461 319 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 FOXB2Q5VYV0 432 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 OR5T1Q8NG75 326 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 OR4F17Q8NGA8 305 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 MS4A10Q96PG2 267 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 OR4F4Q96R69 305 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 THAP7Q9BT49 309 aaPredicted RBP8.68□□□□□ -1.02
LIG1-211ENST00000596457 RSRP1Q9BUV0 290 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
LIG1-211ENST00000596457 HRASLSQ9HDD0 168 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 NUBP2Q9Y5Y2 271 aa8.68□□□□□ -1.02
LIG1-211ENST00000596457 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 MPPED1O15442 326 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 GSTZ1O43708 216 aaPredicted RBP8.67□□□□□ -1.02
LIG1-211ENST00000596457 ACTL6BO94805 426 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 OR2A4O95047 310 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 S1PR2O95136 353 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 HPRT1P00492 218 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 IGHG4P01861 327 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 CD74P04233 296 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 TBPP20226 339 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 PPIFP30405 207 aaKnown RBP8.67□□□□□ -1.02
LIG1-211ENST00000596457 UCP3P55916 312 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 CFHR3Q02985 330 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 MEF2DQ14814 521 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 PRSS8Q16651 343 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 C8orf86Q6ZUL3 223 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 TBC1D26Q86UD7 250 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 ARRDC1Q8N5I2 433 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 DMBX1Q8NFW5 382 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 OR4C16Q8NGL9 310 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 MARCH1Q8TCQ1 289 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 RHOVQ96L33 236 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 DUX3Q96PT4 197 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 OR5B12Q96R08 314 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 OR2A7Q96R45 310 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 SOSTQ9BQB4 213 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 KLK15Q9H2R5 256 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 ZFP57Q9NU63 452 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 MCUBQ9NWR8 336 aa8.67□□□□□ -1.02
LIG1-211ENST00000596457 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
LIG1-211ENST00000596457 CREBL2O60519 120 aaPredicted RBP8.66□□□□□ -1.02
LIG1-211ENST00000596457 KBTBD11O94819 623 aa8.66□□□□□ -1.02
LIG1-211ENST00000596457 ZNF735P0CB33 412 aa8.66□□□□□ -1.02
LIG1-211ENST00000596457 F2RP25116 425 aa8.66□□□□□ -1.02
LIG1-211ENST00000596457 CD40LGP29965 261 aa8.66□□□□□ -1.02
LIG1-211ENST00000596457 RAB9AP51151 201 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms