RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 CA2P00918 260 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 CRYGBP07316 175 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 RRASP10301 218 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 GNRHRP30968 328 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 CX3CL1P78423 397 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 SSBP2P81877 361 aaPredicted RBP12.42□□□□□ -0.42
USHBP1-206ENST00000596436 IL18Q14116 193 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 PLGLAQ15195 96 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 PYHIN1Q6K0P9 492 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 MFSD4AQ8N468 514 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 KLHL30-AS1Q8NEE0 82 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 C15orf40Q8WUR7 153 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 FCAMRQ8WWV6 532 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 SOSTQ9BQB4 213 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 TINAGL1Q9GZM7 467 aaPredicted RBP12.42□□□□□ -0.42
USHBP1-206ENST00000596436 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 U3KQK5 164 aa12.42□□□□□ -0.42
USHBP1-206ENST00000596436 DPPA5A6NC42 116 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 G3V318 75 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 CTDSPLO15194 276 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 SHOXO15266 292 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 CD3DP04234 171 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 EGR2P11161 476 aaPredicted RBP12.41□□□□□ -0.42
USHBP1-206ENST00000596436 LGALS7P47929 136 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 PJVKQ0ZLH3 352 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 CBX3Q13185 183 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 MRGPRG-AS1Q2M3A8 158 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 ZNF66Q6ZN08 573 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 ZNF695Q8IW36 515 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 SMIM4Q8WVI0 70 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 RAX2Q96IS3 184 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 ZNF580Q9UK33 172 aa12.41□□□□□ -0.42
USHBP1-206ENST00000596436 NUDT19A8MXV4 375 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 SLC35B1P78383 322 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 MRPS10P82664 201 aaKnown RBP12.4□□□□□ -0.42
USHBP1-206ENST00000596436 ACTBL2Q562R1 376 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 C19orf54Q5BKX5 351 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 LCNL1Q6ZST4 164 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 RNF152Q8N8N0 203 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 ZBTB34Q8NCN2 500 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 OR6F1Q8NGZ6 308 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-206ENST00000596436 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
USHBP1-206ENST00000596436 TNCP24821 2201 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 CCL24O00175 119 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
USHBP1-206ENST00000596436 CD74P04233 296 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 VDAC1P21796 283 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 PPIFP30405 207 aaKnown RBP12.39□□□□□ -0.43
USHBP1-206ENST00000596436 CRIP2P52943 208 aaPredicted RBP12.39□□□□□ -0.43
USHBP1-206ENST00000596436 TSPAN5P62079 268 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 RNASE10Q5GAN6 216 aaKnown RBP12.39□□□□□ -0.43
USHBP1-206ENST00000596436 AADACL3Q5VUY0 350 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 IDO2Q6ZQW0 420 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 PPP1R27Q86WC6 154 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 TMEM229BQ8NBD8 167 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 OR4S2Q8NH73 311 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
USHBP1-206ENST00000596436 A3GALT2U3KPV4 340 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 V9GYH0 126 aa12.39□□□□□ -0.43
USHBP1-206ENST00000596436 TRAV41A0A0B4J266 112 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 FABP12A6NFH5 140 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 GSTZ1O43708 216 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-206ENST00000596436 IGHG4P01861 327 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-206ENST00000596436 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-206ENST00000596436 TAS2R19P59542 299 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 UBE2KP61086 200 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 FAAP20Q6NZ36 180 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 LHFPL1Q86WI0 220 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 VKORC1L1Q8N0U8 176 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 OR51H1Q8NH63 302 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 DUX3Q96PT4 197 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-206ENST00000596436 RABL2BQ9UNT1 228 aa12.38□□□□□ -0.43
USHBP1-206ENST00000596436 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 SOX15O60248 233 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 PGLYRP1O75594 196 aaPredicted RBP12.37□□□□□ -0.43
USHBP1-206ENST00000596436 RLN1P04808 185 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 RPLP1P05386 114 aaKnown RBP12.37□□□□□ -0.43
USHBP1-206ENST00000596436 TBPP20226 339 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 GNB1P62873 340 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 SSBP1Q04837 148 aaKnown RBP12.37□□□□□ -0.43
USHBP1-206ENST00000596436 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 CCDC190Q86UF4 302 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 SPAG16Q8N0X2 631 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 TEX45Q8NA69 505 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 MINDY2Q8NBR6 621 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 ABHD5Q8WTS1 349 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 DGCR14Q96DF8 476 aaKnown RBP12.37□□□□□ -0.43
USHBP1-206ENST00000596436 LYSTQ99698 3801 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 RSRP1Q9BUV0 290 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms