RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 OR51H1Q8NH63 302 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 OSR1Q8TAX0 266 aaPredicted RBP8.33□□□□□ -1.08
LIG1-210ENST00000596332 GLYATL2Q8WU03 294 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 PRRT1Q99946 306 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 PRSS22Q9GZN4 317 aa8.33□□□□□ -1.08
LIG1-210ENST00000596332 ANK2Q01484 3957 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 LINC00854A0A1B0GVQ3 168 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 CGB1A6NKQ9 187 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 SLC25A17O43808 307 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 SPDEFO95238 335 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
LIG1-210ENST00000596332 LPAR6P43657 344 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 AP3S2P59780 193 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 UBE2KP61086 200 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 CX3CL1P78423 397 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 FOXL1Q12952 345 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 SP6Q3SY56 376 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 ASPHD1Q5U4P2 390 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 ZNF57Q68EA5 555 aaPredicted RBP8.32□□□□□ -1.08
LIG1-210ENST00000596332 LIN54Q6MZP7 749 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 CADM3Q8N126 398 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 TEX45Q8NA69 505 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 LHFPL5Q8TAF8 219 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 ZFAND1Q8TCF1 268 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 NOL4LQ96MY1 436 aaPredicted RBP8.32□□□□□ -1.08
LIG1-210ENST00000596332 PLEKHA2Q9HB19 425 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 FAM212BQ9NTI7 297 aaPredicted RBP8.32□□□□□ -1.08
LIG1-210ENST00000596332 MCUBQ9NWR8 336 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 METTL1Q9UBP6 276 aaKnown RBP8.32□□□□□ -1.08
LIG1-210ENST00000596332 FLVCR2Q9UPI3 526 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 PRELID3BQ9Y3B1 194 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 NUBP2Q9Y5Y2 271 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
LIG1-210ENST00000596332 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 NAP1L6A6NFF2 107 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 CRYM-AS1A6NIL9 109 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 SHOXO15266 292 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 NDUFB6O95139 128 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 HPRT1P00492 218 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 IGKV1-5P01602 117 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 IGF1P05019 195 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 CRYBA1P05813 215 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 MYOD1P15172 320 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 PGAM2P15259 253 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 UCP1P25874 307 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
LIG1-210ENST00000596332 SLC6A1P30531 599 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 CRIP2P52943 208 aaPredicted RBP8.31□□□□□ -1.08
LIG1-210ENST00000596332 RTL8BQ17RB0 113 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 TRIQKQ629K1 86 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 ZNF562Q6V9R5 426 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 PPP1R27Q86WC6 154 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 CMTM1Q8IZ96 169 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 TCTEX1D1Q8N7M0 179 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 OR4F5Q8NH21 305 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 BORCS5Q969J3 196 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 RHOVQ96L33 236 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 HARBI1Q96MB7 349 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 TSNAXQ99598 290 aaKnown RBP8.31□□□□□ -1.08
LIG1-210ENST00000596332 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 C7orf50Q9BRJ6 194 aaKnown RBP8.31□□□□□ -1.08
LIG1-210ENST00000596332 WDR12Q9GZL7 423 aaKnown RBP8.31□□□□□ -1.08
LIG1-210ENST00000596332 BEX1Q9HBH7 125 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 LINC00527Q9UJ94 153 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 SCP2D1Q9UJQ7 156 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 RNF114Q9Y508 228 aa8.31□□□□□ -1.08
LIG1-210ENST00000596332 C3orf85A0A1B0GTC6 90 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 H0Y980 276 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 LYRM1O43325 122 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 SOX15O60248 233 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 PFDN1O60925 122 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 CDS2O95674 445 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 CA2P00918 260 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 ECI1P42126 302 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 KIR2DS2P43631 304 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 TAS2R31P59538 309 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 CATR1Q13166 79 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 ASAH1Q13510 395 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 KIAA0141Q14154 515 aaPredicted RBP8.3□□□□□ -1.08
LIG1-210ENST00000596332 TMEM187Q14656 261 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 PRSS8Q16651 343 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 OR4A47Q6IF82 309 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 SLC25A42Q86VD7 318 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 OR4S2Q8NH73 311 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 TMEM167AQ8TBQ9 72 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 GALNT14Q96FL9 552 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 CLCC1Q96S66 551 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 CITED1Q99966 193 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 SLC25A21Q9BQT8 299 aaPredicted RBP8.3□□□□□ -1.08
LIG1-210ENST00000596332 ZNF747Q9BV97 191 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 OR51J1Q9H342 316 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 ZNF430Q9H8G1 570 aaPredicted RBP8.3□□□□□ -1.08
LIG1-210ENST00000596332 PALMDQ9NP74 551 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 PRR13Q9NZ81 148 aa8.3□□□□□ -1.08
LIG1-210ENST00000596332 TNCP24821 2201 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms