RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GPHB5Q86YW7 130 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 C8orf59Q8N0T1 100 aaPredicted RBP7.45□□□□□ -1.22
LIG1-209ENST00000596104 PACRGLQ8N7B6 248 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 OR56B1Q8NGI3 324 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 OR10J5Q8NHC4 309 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 ADTRPQ96IZ2 230 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 MND1Q9BWT6 205 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 C8orf4Q9NR00 106 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 MLXQ9UH92 298 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 AK6Q9Y3D8 172 aaKnown RBP7.45□□□□□ -1.22
LIG1-209ENST00000596104 SELENOKQ9Y6D0 94 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 HERC2O95714 4834 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 LOC102724200A0A096LPH7 203 aaPredicted RBP7.44□□□□□ -1.22
LIG1-209ENST00000596104 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 HMX3A6NHT5 357 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 A8MWP6 167 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 TEX22C9J3V5 150 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 SPHARQ15513 63 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 C2orf76Q3KRA6 126 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 ZNF57Q68EA5 555 aaPredicted RBP7.44□□□□□ -1.22
LIG1-209ENST00000596104 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
LIG1-209ENST00000596104 SLC25A42Q86VD7 318 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 WFDC3Q8IUB2 231 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 MMD2Q8IY49 270 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 H1FOOQ8IZA3 346 aaPredicted RBP7.44□□□□□ -1.22
LIG1-209ENST00000596104 TMEM203Q969S6 136 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 FAM3DQ96BQ1 224 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 ZNF257Q9Y2Q1 563 aa7.44□□□□□ -1.22
LIG1-209ENST00000596104 A0A0J9YWU9 116 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 TMEM272A0A1B0GTI8 110 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 A0A1B0GW64 132 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 NPIPB5A8MRT5 1133 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 E7EUB6 86 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 MFNGO00587 321 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 DENRO43583 198 aaKnown RBP7.43□□□□□ -1.22
LIG1-209ENST00000596104 CREBL2O60519 120 aaPredicted RBP7.43□□□□□ -1.22
LIG1-209ENST00000596104 ACTL6BO94805 426 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 SCAF4O95104 1147 aaKnown RBP7.43□□□□□ -1.22
LIG1-209ENST00000596104 NDUFB8O95169 186 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
LIG1-209ENST00000596104 TNFRSF9Q07011 255 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 KLK9Q2XQG4 91 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 LIPKQ5VXJ0 399 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
LIG1-209ENST00000596104 UXS1Q8NBZ7 420 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 OR52B4Q8NGK2 314 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 MAFIPQ8WZ33 124 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 RAB3CQ96E17 227 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 KLK9Q9UKQ9 250 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
LIG1-209ENST00000596104 RBM7Q9Y580 266 aaKnown RBP7.43□□□□□ -1.22
LIG1-209ENST00000596104 IGKV1D-8A0A087WSZ0 117 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 RAB27BO00194 218 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 ARL6IP5O75915 188 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 IGHV3-23P01764 117 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 ATF4P18848 351 aaPredicted RBP7.42□□□□□ -1.22
LIG1-209ENST00000596104 ARL3P36405 182 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 RPS25P62851 125 aaKnown RBP7.42□□□□□ -1.22
LIG1-209ENST00000596104 RPL30P62888 115 aaKnown RBP7.42□□□□□ -1.22
LIG1-209ENST00000596104 MRPS15P82914 257 aaKnown RBP7.42□□□□□ -1.22
LIG1-209ENST00000596104 IRF3Q14653 427 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 MED22Q15528 200 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 BTNL8Q6UX41 500 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 CLEC19AQ6UXS0 136 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 Q6ZS49 121 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 Q6ZWC4 215 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 LYG2Q86SG7 212 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 VKORC1L1Q8N0U8 176 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 UFD1Q92890 307 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 GINS4Q9BRT9 223 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 OR51E2Q9H255 320 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 RAB22AQ9UL26 194 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 S4R3C0 116 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
LIG1-209ENST00000596104 TRAV25A0A0B4J276 109 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 ZNF320A2RRD8 509 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 PTGES3LE9PB15 166 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 FCGR3BO75015 233 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 IGLV2-14P01704 120 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 CRYGCP07315 174 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 ZNF735P0CB33 412 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 C8orf88P0DMB2 117 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 AREGP15514 252 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 HIST1H1DP16402 221 aaKnown RBP7.41□□□□□ -1.22
LIG1-209ENST00000596104 GNB3P16520 340 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 BMI1P35226 326 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 RPL27AP46776 148 aaKnown RBP7.41□□□□□ -1.22
LIG1-209ENST00000596104 ANKRD55Q3KP44 614 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 FAM106AQ4KMX7 169 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 OR4A47Q6IF82 309 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 UNQ9165/PRO28630Q6UXU0 137 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 KCTD9Q7L273 389 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 PUSL1Q8N0Z8 303 aaKnown RBP7.41□□□□□ -1.22
LIG1-209ENST00000596104 OR10R2Q8NGX6 335 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 FYTTD1Q96QD9 318 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms