RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 GON7Q9BXV9 100 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 MCUBQ9NWR8 336 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 CA2P00918 260 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 HRASP01112 189 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
LIG1-208ENST00000595758 PI3P19957 117 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 VDAC1P21796 283 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 F2RP25116 425 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 NDPQ00604 133 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 ZNF45Q02386 682 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 PJVKQ0ZLH3 352 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 KLF9Q13886 244 aaPredicted RBP11.3□□□□□ -0.6
LIG1-208ENST00000595758 C10orf99Q6UWK7 81 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 OR4X2Q8NGF9 303 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 OR51S1Q8NGJ8 323 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 ZFAND1Q8TCF1 268 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 ZNF486Q96H40 463 aaPredicted RBP11.3□□□□□ -0.6
LIG1-208ENST00000595758 AIFM2Q9BRQ8 373 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 SCP2D1Q9UJQ7 156 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 ZNF580Q9UK33 172 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 WSB1Q9Y6I7 421 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 PLXNB1O43157 2135 aa11.3□□□□□ -0.6
LIG1-208ENST00000595758 CNIH1O95406 144 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 HPRT1P00492 218 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 FAUP35544 74 aaKnown RBP11.29□□□□□ -0.6
LIG1-208ENST00000595758 ECI1P42126 302 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 GNB1P62873 340 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 FXYD3Q14802 87 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 PRSS8Q16651 343 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 HIST2H2BDQ6DRA6 164 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 TBC1D26Q86UD7 250 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 TCTEX1D1Q8N7M0 179 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 OR13C8Q8NGS7 320 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 MARCH1Q8TCQ1 289 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 MRGPRFQ96AM1 343 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 RHOVQ96L33 236 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 CITED2Q99967 270 aaPredicted RBP11.29□□□□□ -0.6
LIG1-208ENST00000595758 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 SLC2A8Q9NY64 477 aa11.29□□□□□ -0.6
LIG1-208ENST00000595758 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 G3V318 75 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 M0QZ24 198 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 MPPED1O15442 326 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 OR2A4O95047 310 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 CTSDP07339 412 aaPredicted RBP11.28□□□□□ -0.6
LIG1-208ENST00000595758 NQO2P16083 231 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 LPAR6P43657 344 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 INPP1P49441 399 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 PIGPP57054 158 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 TAS2R31P59538 309 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 RND3P61587 244 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 CD83Q01151 205 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 SURF2Q15527 256 aaPredicted RBP11.28□□□□□ -0.6
LIG1-208ENST00000595758 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 TRIQKQ629K1 86 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 ZNF57Q68EA5 555 aaPredicted RBP11.28□□□□□ -0.6
LIG1-208ENST00000595758 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 LINC00299Q6ZSB3 139 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 SSX9Q7RTT3 188 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 COMMD1Q8N668 190 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 HRASLSQ9HDD0 168 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 COPZ2Q9P299 210 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
LIG1-208ENST00000595758 ARPC1BO15143 372 aaKnown RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 S1PR2O95136 353 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 OPN1MWP04001 364 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 OPN1MW2P0DN77 364 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 OPN1MW3P0DN78 364 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 CFHR3Q02985 330 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 TMEM267Q0VDI3 215 aaPredicted RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 BAK1Q16611 211 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 ECSCRQ19T08 205 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 MRGPRG-AS1Q2M3A8 158 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 ZNF585BQ52M93 769 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 NDUFA11Q86Y39 141 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 MMD2Q8IY49 270 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 PUSL1Q8N0Z8 303 aaKnown RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 CCDC71LQ8N9Z2 235 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 SDHCQ99643 169 aaPredicted RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 FAM212BQ9NTI7 297 aaPredicted RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 COMMD9Q9P000 198 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 C14orf166Q9Y224 244 aaKnown RBP11.27□□□□□ -0.61
LIG1-208ENST00000595758 NUBP2Q9Y5Y2 271 aa11.27□□□□□ -0.61
LIG1-208ENST00000595758 TNCP24821 2201 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms