RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 K7N7A8 449 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 TAAR5O14804 337 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 MBPP02686 304 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-202ENST00000595242 RLN2P04090 185 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 NMBP08949 121 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 VDAC1P21796 283 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 GABRA2P47869 451 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 GLIPR1P48060 266 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 EIF4EBP1Q13541 118 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-202ENST00000595242 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 ZNF561Q8N587 486 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 FAM71E2Q8N5Q1 922 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 ZNF645Q8N7E2 425 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 OR4C13Q8NGP0 309 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 OR13A1Q8NGR1 328 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 OR1L1Q8NH94 360 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 FAM234AQ9H0X4 552 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 PLEKHA2Q9HB19 425 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 FAM212BQ9NTI7 297 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-202ENST00000595242 LIN7CQ9NUP9 197 aaKnown RBP10.32□□□□□ -0.76
SCAF1-202ENST00000595242 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 STAB2Q8WWQ8 2551 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 CSMD3Q7Z407 3707 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 ODAMA1E959 279 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 ANKRD34BA5PLL1 514 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 E5RGE8 158 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 HSPA12AO43301 675 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 FBXO24O75426 580 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 SPDEFO95238 335 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 TFF1P04155 84 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 CD28P10747 220 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 MUC1P15941 1255 aaPredicted RBP10.31□□□□□ -0.76
SCAF1-202ENST00000595242 GZMHP20718 246 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 CEACAM6P40199 344 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 P2RX3P56373 397 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 S100A10P60903 97 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 ALKAL2Q6UX46 152 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 VMO1Q7Z5L0 202 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 NDUFA11Q86Y39 141 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 DRAM1Q8N682 238 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 TCTEX1D1Q8N7M0 179 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 MRGPRDQ8TDS7 321 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 LSM10Q969L4 123 aaKnown RBP10.31□□□□□ -0.76
SCAF1-202ENST00000595242 ZNF471Q9BX82 626 aaPredicted RBP10.31□□□□□ -0.76
SCAF1-202ENST00000595242 PARP12Q9H0J9 701 aaKnown RBP10.31□□□□□ -0.76
SCAF1-202ENST00000595242 SLC25A32Q9H2D1 315 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 JPT1Q9UK76 154 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 NSG2Q9Y328 171 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 U3KQK5 164 aa10.31□□□□□ -0.76
SCAF1-202ENST00000595242 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 LEUTXA8MZ59 168 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 F2RL2O00254 374 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 ITGB1BP1O14713 200 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 ST8SIA3O43173 380 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 CGB3P0DN86 165 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 CGB7P0DN87 165 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 RRASP10301 218 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 TPT1P13693 172 aaKnown RBP10.3□□□□□ -0.76
SCAF1-202ENST00000595242 IRF2P14316 349 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 P2RY1P47900 373 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 TMEM30BQ3MIR4 351 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 ZNF788Q6ZQV5 615 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 OR52M1Q8NGK5 317 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 GAFA1Q96PS6 74 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 RAB9BQ9NP90 201 aa10.3□□□□□ -0.76
SCAF1-202ENST00000595242 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 SPINT2O43291 252 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 PITX3O75364 302 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 GAPDHP04406 335 aaKnown RBP10.29□□□□□ -0.76
SCAF1-202ENST00000595242 OR8U9P0C7N5 309 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
SCAF1-202ENST00000595242 SSTR5P35346 364 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 EIF5AP63241 154 aaKnown RBP10.29□□□□□ -0.76
SCAF1-202ENST00000595242 GNMTQ14749 295 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 KIAA2026Q5HYC2 2103 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 PRR18Q8N4B5 295 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 DMBX1Q8NFW5 382 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 OR52L2PQ8NGH6 319 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 OR8U1Q8NH10 309 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 ARL11Q969Q4 196 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 CITED2Q99967 270 aaPredicted RBP10.29□□□□□ -0.76
SCAF1-202ENST00000595242 OR6C3Q9NZP0 311 aa10.29□□□□□ -0.76
SCAF1-202ENST00000595242 RCL1Q9Y2P8 373 aaKnown RBP10.29□□□□□ -0.76
SCAF1-202ENST00000595242 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
SCAF1-202ENST00000595242 A0A1B0GU03 582 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 H3BUX3 64 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 LGALS8O00214 317 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 NPFFO15130 113 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 SIGLEC5O15389 551 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 ADAM20O43506 726 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 TNFSF12O43508 249 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 YPEL1O60688 119 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 IGKV1-39P01597 117 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 IGKV1D-39P04432 117 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
SCAF1-202ENST00000595242 ID3Q02535 119 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms