RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 SLC5A7Q9GZV3 580 aa11.42□□□□□ -0.58
USE1-205ENST00000594724 MRPS7Q9Y2R9 242 aaKnown RBP11.42□□□□□ -0.58
USE1-205ENST00000594724 IGHV4OR15-8A0A075B7B6 117 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 A0A087WW49 117 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 MSGN1A6NI15 193 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 LGALS1P09382 135 aaKnown RBP11.41□□□□□ -0.58
USE1-205ENST00000594724 OR8U8P0C7N1 319 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 PRSS3P35030 304 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 RFX2P48378 723 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 CTF1Q16619 201 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 DEFB121Q5J5C9 76 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 C9orf66Q5T8R8 295 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 GPR107Q5VW38 600 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 ZNF66Q6ZN08 573 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 POC5Q8NA72 575 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 GIMAP1Q8WWP7 306 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 ACOT12Q8WYK0 555 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 DCUN1D4Q92564 292 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 RHOVQ96L33 236 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 PHB2Q99623 299 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 SLA2Q9H6Q3 261 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 ZNF430Q9H8G1 570 aaPredicted RBP11.41□□□□□ -0.58
USE1-205ENST00000594724 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
USE1-205ENST00000594724 LINC01619G3V211 115 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 HPGDSO60760 199 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 GABARAPO95166 117 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 PMP2P02689 132 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 ELK1P19419 428 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 RORCP51449 518 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 SLURP1P55000 103 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 TMEM17Q86X19 198 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 OR4S2Q8NH73 311 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 SRSF12Q8WXF0 261 aaKnown RBP11.4□□□□□ -0.58
USE1-205ENST00000594724 DLX4Q92988 240 aaPredicted RBP11.4□□□□□ -0.58
USE1-205ENST00000594724 EHFQ9NZC4 300 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 SCOCQ9UIL1 159 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 ANAPC10Q9UM13 185 aa11.4□□□□□ -0.58
USE1-205ENST00000594724 SMIM31A0A1B0GVY4 71 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 APOA1P02647 267 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
USE1-205ENST00000594724 NAT1P18440 290 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 DGCR2P98153 550 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 DEFA5Q01523 94 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 ZNF818PQ6ZRF7 136 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 SNX29P2Q8IUI4 249 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 TMEM68Q96MH6 324 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 MRPS26Q9BYN8 205 aaKnown RBP11.39□□□□□ -0.59
USE1-205ENST00000594724 COA4Q9NYJ1 87 aa11.39□□□□□ -0.59
USE1-205ENST00000594724 C13orf42A0A1B0GVH6 325 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 H3BUA1 57 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 SULT1C2O00338 296 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 OVOL1O14753 267 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 RAMP3O60896 148 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 ACTL6BO94805 426 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 ALDH3B2P48448 385 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 HERV-K104P61576 105 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 DYRK1AQ13627 763 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 MSMO1Q15800 293 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 DHRS11Q6UWP2 260 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 SSX9Q7RTT3 188 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 MMD2Q8IY49 270 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 ZBTB34Q8NCN2 500 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 GPX8Q8TED1 209 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 CMTM3Q96MX0 182 aa11.38□□□□□ -0.59
USE1-205ENST00000594724 ZNF2Q9BSG1 426 aaPredicted RBP11.38□□□□□ -0.59
USE1-205ENST00000594724 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
USE1-205ENST00000594724 ANKRD34BA5PLL1 514 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 FAM25AB3EWG3 89 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 FAM25CB3EWG5 89 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 FAM25GB3EWG6 89 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 MPPED1O15442 326 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
USE1-205ENST00000594724 OR2A4O95047 310 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 OR9G9P0C7N8 305 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 HLA-DMAP28067 261 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 ECI1P42126 302 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 GPR141Q7Z602 305 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 SPAG16Q8N0X2 631 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 PUSL1Q8N0Z8 303 aaKnown RBP11.37□□□□□ -0.59
USE1-205ENST00000594724 ADAD2Q8NCV1 583 aaKnown RBP11.37□□□□□ -0.59
USE1-205ENST00000594724 OR5H2Q8NGV7 314 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 OR51H1Q8NH63 302 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 OR2A7Q96R45 310 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 PRR25Q96S07 402 aa11.37□□□□□ -0.59
USE1-205ENST00000594724 A0A0G2JLM5 398 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 HMX3A6NHT5 357 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 E7EUB6 86 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 CREBL2O60519 120 aaPredicted RBP11.36□□□□□ -0.59
USE1-205ENST00000594724 KBTBD11O94819 623 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 HRASP01112 189 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 PRH1P02810 166 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 ZNF182P17025 639 aaPredicted RBP11.36□□□□□ -0.59
USE1-205ENST00000594724 GNRHRP30968 328 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 HRH1P35367 487 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 KIR2DS2P43631 304 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 TAS2R46P59540 309 aa11.36□□□□□ -0.59
USE1-205ENST00000594724 VSTM2AQ8TAG5 236 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms