RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 DCUN1D5Q9BTE7 237 aa17.17■□□□□ 0.34
SSBP4-203ENST00000593641 ZNF430Q9H8G1 570 aaPredicted RBP17.17■□□□□ 0.34
SSBP4-203ENST00000593641 METTL21EPA6NDL7 271 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 RAB27BO00194 218 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 JTBO76095 146 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 SAA1P0DJI8 122 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-203ENST00000593641 RAB6AP20340 208 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 MYL9P24844 172 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 CDK10Q15131 360 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 CD300EQ496F6 205 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-203ENST00000593641 FAM209BQ5JX69 171 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 Q6ZS49 121 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 PRSS48Q7RTY5 328 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 MMD2Q8IY49 270 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 IL17DQ8TAD2 202 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 NEURL2Q9BR09 285 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 RETNQ9HD89 108 aa17.16■□□□□ 0.34
SSBP4-203ENST00000593641 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.15■□□□□ 0.34
SSBP4-203ENST00000593641 TRBV9A0A0B4J1U6 114 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 IFITM5A6NNB3 132 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 FCGR3BO75015 233 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 MAP2K4P45985 399 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 MECP2P51608 486 aaKnown RBP17.15■□□□□ 0.34
SSBP4-203ENST00000593641 OR10A3P58181 314 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 ZNF45Q02386 682 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 SLC25A42Q86VD7 318 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 NECAP1Q8NC96 275 aa17.15■□□□□ 0.34
SSBP4-203ENST00000593641 KCTD12Q96CX2 325 aaKnown RBP17.15■□□□□ 0.34
SSBP4-203ENST00000593641 TRAV1-2A0A0B4J238 106 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 ARL6IP1Q15041 203 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 C15orf32Q32M92 178 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 KCTD9Q7L273 389 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 TTC9CQ8N5M4 171 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 ZNF645Q8N7E2 425 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 FAM110AQ9BQ89 295 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 HIPK2Q9H2X6 1198 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 MRPS7Q9Y2R9 242 aaKnown RBP17.14■□□□□ 0.33
SSBP4-203ENST00000593641 PRELID3BQ9Y3B1 194 aa17.14■□□□□ 0.33
SSBP4-203ENST00000593641 J3QRK9 145 aa17.13■□□□□ 0.33
SSBP4-203ENST00000593641 CD36P16671 472 aa17.13■□□□□ 0.33
SSBP4-203ENST00000593641 CRHBPP24387 322 aa17.13■□□□□ 0.33
SSBP4-203ENST00000593641 C10orf55Q5SWW7 151 aa17.13■□□□□ 0.33
SSBP4-203ENST00000593641 PLECQ15149 4684 aaKnown RBP17.12■□□□□ 0.33
SSBP4-203ENST00000593641 IGKV1D-8A0A087WSZ0 117 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 OR2J3O76001 311 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 RAB3BP20337 219 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 DTYMKP23919 212 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 LINC00322Q6ZN03 302 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-203ENST00000593641 ZNF367Q7RTV3 350 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 ATG5Q9H1Y0 275 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 ZNF257Q9Y2Q1 563 aa17.12■□□□□ 0.33
SSBP4-203ENST00000593641 PPP5D1E7EU14 171 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 SLC22A5O76082 557 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 CD7P09564 240 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 CTXN2P0C2S0 81 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 TBCEQ15813 527 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-203ENST00000593641 GUCA2BQ16661 112 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 DEFB114Q30KQ6 69 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 OR2B11Q5JQS5 317 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 DEFB125Q8N687 156 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 VSTM2AQ8TAG5 236 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 SRD5A3Q9H8P0 318 aa17.11■□□□□ 0.33
SSBP4-203ENST00000593641 NKX1-2Q9UD57 310 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-203ENST00000593641 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 C2orf70A6NJV1 201 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 ZNF785A8K8V0 405 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 OR11H12B2RN74 326 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 GGCTO75223 188 aaKnown RBP17.1■□□□□ 0.33
SSBP4-203ENST00000593641 SSX1Q16384 188 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 ST6GALNAC5Q9BVH7 336 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 OR51E2Q9H255 320 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 TECRQ9NZ01 308 aaKnown RBP17.1■□□□□ 0.33
SSBP4-203ENST00000593641 RBMX2Q9Y388 322 aaKnown RBP17.1■□□□□ 0.33
SSBP4-203ENST00000593641 OR2W1Q9Y3N9 320 aa17.1■□□□□ 0.33
SSBP4-203ENST00000593641 FOLR2P14207 255 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 NFYAP23511 347 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-203ENST00000593641 KIR2DS2P43631 304 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 OR4S2Q8NH73 311 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 WFDC10AQ9H1F0 79 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 ZC4H2Q9NQZ6 224 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 NDUFB11Q9NX14 153 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 FBXL7Q9UJT9 491 aa17.09■□□□□ 0.33
SSBP4-203ENST00000593641 ELF5Q9UKW6 265 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-203ENST00000593641 RBMY1BA6NDE4 496 aaKnown RBP17.08■□□□□ 0.32
SSBP4-203ENST00000593641 RBMY1EA6NEQ0 496 aaKnown RBP17.08■□□□□ 0.32
SSBP4-203ENST00000593641 HMX3A6NHT5 357 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 KBTBD11O94819 623 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 HLA-AP01891 365 aaKnown RBP17.08■□□□□ 0.32
SSBP4-203ENST00000593641 HLA-DQB1P01920 261 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 RBMY1DP0C7P1 496 aaKnown RBP17.08■□□□□ 0.32
SSBP4-203ENST00000593641 RPL27AP46776 148 aaKnown RBP17.08■□□□□ 0.32
SSBP4-203ENST00000593641 VKORC1L1Q8N0U8 176 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 NRG4Q8WWG1 115 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 OR2A7Q96R45 310 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 BLOC1S6Q9UL45 172 aa17.08■□□□□ 0.32
SSBP4-203ENST00000593641 NPIPB5A8MRT5 1133 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 ANKRD65E5RJM6 399 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 LGALS9O00182 355 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 DHFRP00374 187 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 RPL30P62888 115 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms