RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NDPQ00604 133 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 PJVKQ0ZLH3 352 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 TMEM187Q14656 261 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 PSG5Q15238 335 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 MMDQ15546 238 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 MRGPRG-AS1Q2M3A8 158 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 C10orf55Q5SWW7 151 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 C11orf87Q6NUJ2 197 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 LIAT1Q6ZQX7 453 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 SLC25A42Q86VD7 318 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 ZBTB34Q8NCN2 500 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 ZNF486Q96H40 463 aaPredicted RBP7.66□□□□□ -1.18
DDX39A-220ENST00000593008 HARBI1Q96MB7 349 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 CLCC1Q96S66 551 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 SLC25A21Q9BQT8 299 aaPredicted RBP7.66□□□□□ -1.18
DDX39A-220ENST00000593008 SLC25A33Q9BSK2 321 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 FBXL15Q9H469 300 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 LIN7CQ9NUP9 197 aaKnown RBP7.66□□□□□ -1.18
DDX39A-220ENST00000593008 SIGLEC9Q9Y336 463 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 NUBP2Q9Y5Y2 271 aa7.66□□□□□ -1.18
DDX39A-220ENST00000593008 C9orf170A2RU37 121 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 CLPSL1A2RUU4 121 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 LINC01548A6NM66 108 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 DBX1A6NMT0 343 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 FCN1O00602 326 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 SHOXO15266 292 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 SFT2D2O95562 160 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 PTTG1O95997 202 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 MOSP00540 346 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 HLA-AP01891 365 aaKnown RBP7.65□□□□□ -1.18
DDX39A-220ENST00000593008 OR4E1P0C645 316 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 S100GP29377 79 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 G6PCP35575 357 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 ECI1P42126 302 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 OR2B8PP59922 312 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 RPS16P62249 146 aaKnown RBP7.65□□□□□ -1.18
DDX39A-220ENST00000593008 BLCAPP62952 87 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 DHODHQ02127 395 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 CATR1Q13166 79 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 DHRS2Q13268 280 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 EBI3Q14213 229 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 OXA1LQ15070 435 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 RTL8BQ17RB0 113 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 RGS21Q2M5E4 152 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 C2orf68Q2NKX9 166 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 TRIM16LQ309B1 348 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 C4orf46Q504U0 113 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 TMEM177Q53S58 311 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 LPCAT3Q6P1A2 487 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 SHISA2Q6UWI4 295 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 Q6ZSV7 163 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 Q8N9W7 124 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 CCDC71LQ8N9Z2 235 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 DUSP18Q8NEJ0 188 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 OR2T10Q8NGZ9 312 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 OR4S2Q8NH73 311 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 LINC01006Q8NI28 216 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 GLYATL2Q8WU03 294 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 WFDC12Q8WWY7 111 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 R3HDM4Q96D70 268 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 ADTRPQ96IZ2 230 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 HSPB9Q9BQS6 159 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 NSG2Q9Y328 171 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
DDX39A-220ENST00000593008 NCBP2LA6PVI3 153 aaKnown RBP7.64□□□□□ -1.19
DDX39A-220ENST00000593008 INMT-MINDY4F8WBC2 141 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 CCSO14618 274 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 NBR2O15453 112 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 OR2F2O95006 317 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 KRASP01116 189 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 CRYGBP07316 175 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 OR9G9P0C7N8 305 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 FAM106CPP0CH98 169 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 UCP1P25874 307 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 KRTAP10-3P60369 221 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 CBX3Q13185 183 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM268Q5VZI3 342 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 OR4A47Q6IF82 309 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 C19orf35Q6ZS72 473 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 LYZL2Q7Z4W2 148 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 SGPP2Q8IWX5 399 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 SELENOHQ8IZQ5 122 aaKnown RBP7.64□□□□□ -1.19
DDX39A-220ENST00000593008 FAM71E2Q8N5Q1 922 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 SLC35G3Q8N808 338 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 C5orf56Q8N8D9 126 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 FLYWCH2Q96CP2 140 aaKnown RBP7.64□□□□□ -1.19
DDX39A-220ENST00000593008 RBM14Q96PK6 669 aaKnown RBP7.64□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM222Q9H0R3 208 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 TMEM140Q9NV12 185 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 METTL1Q9UBP6 276 aaKnown RBP7.64□□□□□ -1.19
DDX39A-220ENST00000593008 PRELID3BQ9Y3B1 194 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 FBXO7Q9Y3I1 522 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 MMP24Q9Y5R2 645 aa7.64□□□□□ -1.19
DDX39A-220ENST00000593008 A0A1B0GUS0 222 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 A0A1B0GW64 132 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 MPTX1A8MV57 137 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 M0QZK8 103 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 ADAP1O75689 374 aa7.63□□□□□ -1.19
DDX39A-220ENST00000593008 NXPH3O95157 252 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms