RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HACD4Q5VWC8 232 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 LAX1Q8IWV1 398 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 TTC9CQ8N5M4 171 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 NECAP1Q8NC96 275 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 VSTM2AQ8TAG5 236 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 MAFIPQ8WZ33 124 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 THAP7Q9BT49 309 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-205ENST00000592333 ATG5Q9H1Y0 275 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 PALMDQ9NP74 551 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 RAB26Q9ULW5 256 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 MRPS7Q9Y2R9 242 aaKnown RBP14.37□□□□□ -0.11
CCDC43-205ENST00000592333 DNAH7Q8WXX0 4024 aa14.37□□□□□ -0.11
CCDC43-205ENST00000592333 NOTOA8MTQ0 251 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 MPPED1O15442 326 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 CDNFQ49AH0 187 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 CNIH2Q6PI25 160 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 ISOC1Q96CN7 298 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 KCTD12Q96CX2 325 aaKnown RBP14.36□□□□□ -0.11
CCDC43-205ENST00000592333 CNBD2Q96M20 576 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 ZNF430Q9H8G1 570 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-205ENST00000592333 EDA2RQ9HAV5 297 aa14.36□□□□□ -0.11
CCDC43-205ENST00000592333 IGKV1D-8A0A087WSZ0 117 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.35□□□□□ -0.11
CCDC43-205ENST00000592333 TUSC2O75896 110 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 RHOGP84095 191 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 ATP5G2Q06055 141 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 UBE2UQ5VVX9 321 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 HAPLN4Q86UW8 402 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 ACOT12Q8WYK0 555 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 HSD17B10Q99714 261 aaKnown RBP14.35□□□□□ -0.11
CCDC43-205ENST00000592333 OR51E2Q9H255 320 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 AKIP1Q9NQ31 210 aa14.35□□□□□ -0.11
CCDC43-205ENST00000592333 RBMX2Q9Y388 322 aaKnown RBP14.35□□□□□ -0.11
CCDC43-205ENST00000592333 SAA1P0DJI8 122 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-205ENST00000592333 MAS1LP35410 378 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 SCAND1P57086 179 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 MSMO1Q15800 293 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 C22orf42Q6IC83 251 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 NR2C2APQ86WQ0 139 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 FCGR1BQ92637 280 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 ST6GALNAC5Q9BVH7 336 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 ZNF257Q9Y2Q1 563 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 TNCP24821 2201 aa14.34□□□□□ -0.11
CCDC43-205ENST00000592333 FCGR3BO75015 233 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 TRBV12-3P01733 135 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 IFNA6P05013 189 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 HAGHQ16775 308 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 IDO2Q6ZQW0 420 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 OR4S2Q8NH73 311 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 DCUN1D5Q9BTE7 237 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 TUBA4BQ9H853 241 aa14.33□□□□□ -0.12
CCDC43-205ENST00000592333 NPIPB5A8MRT5 1133 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 BMPR1BO00238 502 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 RBMXL2O75526 392 aaKnown RBP14.32□□□□□ -0.12
CCDC43-205ENST00000592333 IGLV2-14P01704 120 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 ZNF45Q02386 682 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 EXOSC2Q13868 293 aaKnown RBP14.32□□□□□ -0.12
CCDC43-205ENST00000592333 KLK9Q2XQG4 91 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 ZNF66Q6ZN08 573 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 OR2A7Q96R45 310 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 AIFM2Q9BRQ8 373 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 TXNL4BQ9NX01 149 aaKnown RBP14.32□□□□□ -0.12
CCDC43-205ENST00000592333 ANXA10Q9UJ72 324 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 KLK9Q9UKQ9 250 aa14.32□□□□□ -0.12
CCDC43-205ENST00000592333 LGALS9O00182 355 aa14.31□□□□□ -0.12
CCDC43-205ENST00000592333 KBTBD11O94819 623 aa14.31□□□□□ -0.12
CCDC43-205ENST00000592333 APELAP0DMC3 54 aa14.31□□□□□ -0.12
CCDC43-205ENST00000592333 GNG2P59768 71 aa14.31□□□□□ -0.12
CCDC43-205ENST00000592333 TMEM167AQ8TBQ9 72 aa14.31□□□□□ -0.12
CCDC43-205ENST00000592333 YTHDF1Q9BYJ9 559 aaKnown RBP14.31□□□□□ -0.12
CCDC43-205ENST00000592333 TECRQ9NZ01 308 aaKnown RBP14.31□□□□□ -0.12
CCDC43-205ENST00000592333 ELF5Q9UKW6 265 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-205ENST00000592333 LCE6AA0A183 80 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 TMEM127O75204 238 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 DHFRP00374 187 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 HRASP01112 189 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 NFYAP23511 347 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-205ENST00000592333 KIR2DS2P43631 304 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 EIF4EBP1Q13541 118 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-205ENST00000592333 C15orf32Q32M92 178 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 LINC00322Q6ZN03 302 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-205ENST00000592333 PUSL1Q8N0Z8 303 aaKnown RBP14.3□□□□□ -0.12
CCDC43-205ENST00000592333 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 SLC2A8Q9NY64 477 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 SSR3Q9UNL2 185 aa14.3□□□□□ -0.12
CCDC43-205ENST00000592333 A0A0A6YYH2 397 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 TMEM235A6NFC5 223 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 A6NJ64 397 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 GGCTO75223 188 aaKnown RBP14.29□□□□□ -0.12
CCDC43-205ENST00000592333 CRYGCP07315 174 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 ZNF735P0CB33 412 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 RPL30P62888 115 aaKnown RBP14.29□□□□□ -0.12
CCDC43-205ENST00000592333 GPHB5Q86YW7 130 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 SPARTQ8N0X7 666 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 MFSD4AQ8N468 514 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 ZBTB34Q8NCN2 500 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 OR4A5Q8NH83 315 aa14.29□□□□□ -0.12
CCDC43-205ENST00000592333 IL17DQ8TAD2 202 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms