RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 Q3ZCU0 254 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 RSBN1Q5VWQ0 802 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-226ENST00000591534 TMEM65Q6PI78 240 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 C6orf201Q7Z4U5 140 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 LINC00311Q8N616 119 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 GALMQ96C23 342 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 ANXA10Q9UJ72 324 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 ANAPC10Q9UM13 185 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 TRAV39A0A0B4J263 110 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 TRDCB7Z8K6 153 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 SDCBPO00560 298 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-226ENST00000591534 NAPSAO96009 420 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 FCGR3AP08637 254 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 OR8U8P0C7N1 319 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 SSTR5P35346 364 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 TMEM50BP56557 158 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 PLAC9Q5JTB6 97 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF497Q6ZNH5 498 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 C18orf65Q6ZTR6 163 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 GAPTQ8N292 157 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 RNF152Q8N8N0 203 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 OR10J5Q8NHC4 309 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 TERB2Q8NHR7 220 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 PLPPR1Q8TBJ4 325 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 C4orf3Q8WVX3 66 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ASB13Q8WXK3 278 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ARL11Q969Q4 196 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 PPP1R14BQ96C90 147 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF486Q96H40 463 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-226ENST00000591534 SDHCQ99643 169 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-226ENST00000591534 GINS4Q9BRT9 223 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 NICN1Q9BSH3 213 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 FAAP24Q9BTP7 215 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ST6GALNAC5Q9BVH7 336 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ALX4Q9H161 411 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-226ENST00000591534 KLK11Q9UBX7 282 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 AK3Q9UIJ7 227 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF256Q9Y2P7 627 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-226ENST00000591534 KCNK7Q9Y2U2 307 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 LSM4Q9Y4Z0 139 aaKnown RBP7.39□□□□□ -1.23
BRCA1-226ENST00000591534 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
BRCA1-226ENST00000591534 UBE2QL1A1L167 161 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 HSPA12AO43301 675 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 IGHG4P01861 327 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 IGF1P05019 195 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 ANXA3P12429 323 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 ZBTB25P24278 435 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 REG1BP48304 166 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 LUMP51884 338 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-226ENST00000591534 HERV-K104P61576 105 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 DIAPH2-AS1Q14236 149 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 MSMO1Q15800 293 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 MOGAT2Q3SYC2 334 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 OVCH2Q7RTZ1 564 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF429Q86V71 674 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 CMTM1Q8IZ96 169 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 Q8N6K4 173 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 Q8N9W7 124 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 CCDC71LQ8N9Z2 235 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 NUDCD2Q8WVJ2 157 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 GIMAP1Q8WWP7 306 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 RTN4IP1Q8WWV3 396 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-226ENST00000591534 DUX3Q96PT4 197 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 PRR25Q96S07 402 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 S1PR3Q99500 378 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 MARVELD1Q9BSK0 173 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 KRTAP9-9Q9BYP9 154 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 HRASLSQ9HDD0 168 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 GNG12Q9UBI6 72 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 ZNF580Q9UK33 172 aa7.38□□□□□ -1.23
BRCA1-226ENST00000591534 C14orf166Q9Y224 244 aaKnown RBP7.38□□□□□ -1.23
BRCA1-226ENST00000591534 A0A0A6YYD4 124 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 IGHV3-72A0A0B4J1Y9 119 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 A0A1W2PPE3 182 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 FABP7O15540 132 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 NDUFB6O95139 128 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 TCRBP04435 133 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 HRH1P35367 487 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 UCP3P55916 312 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 SRPXP78539 464 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 HTD2P86397 168 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 SIGIRRQ6IA17 410 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 FAM53AQ6NSI3 398 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-226ENST00000591534 DHRS11Q6UWP2 260 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 IDO2Q6ZQW0 420 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 SLC38A6Q8IZM9 456 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 CENPSQ8N2Z9 138 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 OR11H1Q8NG94 326 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 UBE2E2Q96LR5 201 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 SULT4A1Q9BR01 284 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 C11orf54Q9H0W9 315 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-226ENST00000591534 Q9N2K0 584 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 EHFQ9NZC4 300 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 CACFD1Q9UGQ2 172 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 VSIG4Q9Y279 399 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 KCNIP3Q9Y2W7 256 aa7.37□□□□□ -1.23
BRCA1-226ENST00000591534 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 SNRPGP15A8MWD9 76 aa7.36□□□□□ -1.23
BRCA1-226ENST00000591534 INMT-MINDY4F8WBC2 141 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms