RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 HAPLN4Q86UW8 402 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 PAQR4Q8N4S7 273 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 OR2C3Q8N628 320 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 OR51G1Q8NGK1 321 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF436Q9C0F3 470 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 SLC25A22Q9H936 323 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 DBX1A6NMT0 343 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 TEX36Q5VZQ5 186 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 FAM122CQ6P4D5 195 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 OR5T1Q8NG75 326 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 YTHDF2Q9Y5A9 579 aaKnown RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 TCAPO15273 167 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 SOCS1O15524 211 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CELA3BP08861 270 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 FFAR4Q5NUL3 377 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 PAPPA-AS1Q5QFB9 102 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 MAFIPQ8WZ33 124 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 ALX4Q9H161 411 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 ACACAQ13085 2346 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 EP300Q09472 2414 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 MUC6Q6W4X9 2439 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 F8W036 122 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 TBX6O95947 436 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CXorf1O96002 111 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 IGHV2-5P01817 119 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 RAB5AP20339 215 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 ELLP55199 621 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF674Q2M3X9 581 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 C8orf31Q8N9H6 132 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 PCNTO95613 3336 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CLPSL1A2RUU4 121 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 RAMP3O60896 148 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 OR5AC1P0C628 307 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CTRB1P17538 263 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 KLF17Q5JT82 389 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CTRB2Q6GPI1 263 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 C19orf35Q6ZS72 473 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 KLHL30-AS1Q8NEE0 82 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 SFT2D1Q8WV19 159 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 NABP1Q96AH0 204 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 TCEAL7Q9BRU2 100 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 TINAGL1Q9GZM7 467 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-212ENST00000591126 LPAR5Q9H1C0 372 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 BET1LQ9NYM9 111 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CSAG2Q9Y5P2 127 aa5.24□□□□□ -1.57
SMAD4-212ENST00000591126 CKAP5Q14008 2032 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 TRAV9-2A0A087WT02 112 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 A0A0G2JK05 382 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 UBE2L5PA0A1B0GUS4 154 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 OR10J1P30954 320 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 DEFA5Q01523 94 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 RIGQ13278 110 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 RNF212Q495C1 297 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 LCN15Q6UWW0 184 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 HSD17B11Q8NBQ5 300 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 Q8NFD4 153 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 GATAD1Q8WUU5 269 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 MS4A10Q96PG2 267 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 TRAV14DV4A0A0A6YYC5 116 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 A0A1W2PRX2 142 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 ANKRD20A5PA0PJZ0 165 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM14DPA8MWL7 114 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 OVOL1O14753 267 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 SNAPINO95295 136 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 MYCNOSP40205 109 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 SERF2P84101 59 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 PIP4P2Q8N4L2 257 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 LINC00311Q8N616 119 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 OR5AU1Q8NGC0 362 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 LHFPL5Q8TAF8 219 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 TPPP3Q9BW30 176 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 SRRQ9GZT4 340 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 KLK5Q9Y337 293 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-212ENST00000591126 TRGV11A0A075B6L2 103 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 OR11H12B2RN74 326 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 C12orf77C9JDV5 145 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 AGPAT2O15120 278 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 CLEC2LP0C7M8 214 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 COL8A2P25067 703 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 HELZP42694 1942 aaKnown RBP5.23□□□□□ -1.57
SMAD4-212ENST00000591126 DGCR2P98153 550 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 UBE2V2Q15819 145 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 PRSS53Q2L4Q9 553 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF324BQ6AW86 544 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-212ENST00000591126 SSX7Q7RTT5 188 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 RMI2Q96E14 147 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 AP1S3Q96PC3 154 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 CABLES2Q9BTV7 478 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 IGHV3-72A0A0B4J1Y9 119 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 MARCH11A6NNE9 402 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 SLC31A2O15432 143 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 TRGC1P0CF51 173 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 MPZP25189 248 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 ERVS71-1P61550 626 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 RELBQ01201 579 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 HGFACQ04756 655 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 PAX8Q06710 450 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 SLC25A48Q6ZT89 311 aaKnown RBP5.23□□□□□ -1.57
SMAD4-212ENST00000591126 ANGPTL6Q8NI99 470 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms