RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 ARL6IP5O75915 188 aa19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 DIRAS3O95661 229 aa19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 SAA1P0DJI8 122 aaPredicted RBP19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 GUCA2BQ16661 112 aa19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 HES5Q5TA89 166 aa19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 WDR89Q96FK6 387 aaPredicted RBP19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 ADTRPQ96IZ2 230 aa19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 ZC4H2Q9NQZ6 224 aa19.3■□□□□ 0.68
CAPNS1-211ENST00000590874 C2orf70A6NJV1 201 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 TNFAIP8O95379 198 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 HLA-AP01891 365 aaKnown RBP19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 HSMCR30P0CW71 290 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 FOLR2P14207 255 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 GNB3P16520 340 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 CALRP27797 417 aaKnown RBP19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 TPBGQ13641 420 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 TTC9CQ8N5M4 171 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 NECAP1Q8NC96 275 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 OSR1Q8TAX0 266 aaPredicted RBP19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 GINS4Q9BRT9 223 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 YTHDF1Q9BYJ9 559 aaKnown RBP19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 RAB22AQ9UL26 194 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 V9GY05 133 aa19.29■□□□□ 0.68
CAPNS1-211ENST00000590874 MFNGO00587 321 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 OR2J3O76001 311 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 KIR2DS2P43631 304 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 CDK10Q15131 360 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 C15orf32Q32M92 178 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 H1FOOQ8IZA3 346 aaPredicted RBP19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 KCTD12Q96CX2 325 aaKnown RBP19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 SPIN2AQ99865 258 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 SPIN2BQ9BPZ2 258 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 SELENOKQ9Y6D0 94 aa19.28■□□□□ 0.68
CAPNS1-211ENST00000590874 FABP5Q01469 135 aa19.27■□□□□ 0.68
CAPNS1-211ENST00000590874 C19orf35Q6ZS72 473 aa19.27■□□□□ 0.68
CAPNS1-211ENST00000590874 OR10R2Q8NGX6 335 aa19.27■□□□□ 0.68
CAPNS1-211ENST00000590874 A0A075B6Q4 140 aa19.26■□□□□ 0.67
CAPNS1-211ENST00000590874 IGKV1D-8A0A087WSZ0 117 aa19.26■□□□□ 0.67
CAPNS1-211ENST00000590874 ACTL6BO94805 426 aa19.26■□□□□ 0.67
CAPNS1-211ENST00000590874 TRAM1Q15629 374 aa19.26■□□□□ 0.67
CAPNS1-211ENST00000590874 CACNG8Q8WXS5 425 aa19.26■□□□□ 0.67
CAPNS1-211ENST00000590874 SCN3BQ9NY72 215 aa19.26■□□□□ 0.67
CAPNS1-211ENST00000590874 HMX3A6NHT5 357 aa19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 CREBL2O60519 120 aaPredicted RBP19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 OR2C1O95371 312 aa19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 HIST1H1DP16402 221 aaKnown RBP19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 PSMA1P25786 263 aaKnown RBP19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 KCTD21Q4G0X4 260 aa19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 MMD2Q8IY49 270 aa19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 TECRQ9NZ01 308 aaKnown RBP19.25■□□□□ 0.67
CAPNS1-211ENST00000590874 J3QRK9 145 aa19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 LGALS9O00182 355 aa19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 RAB27BO00194 218 aa19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 FCGR3BO75015 233 aa19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 GGCTO75223 188 aaKnown RBP19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 DCUN1D5Q9BTE7 237 aa19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 BLOC1S6Q9UL45 172 aa19.24■□□□□ 0.67
CAPNS1-211ENST00000590874 TEX22C9J3V5 150 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 IGHV3-23P01764 117 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 GADD45AP24522 165 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 OR10A3P58181 314 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 MLLT11Q13015 90 aaPredicted RBP19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 OR2B11Q5JQS5 317 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 TMEM61Q8N0U2 210 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 VKORC1L1Q8N0U8 176 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 LINC00476Q8WZB0 136 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 FBXL7Q9UJT9 491 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 ZNF257Q9Y2Q1 563 aa19.23■□□□□ 0.67
CAPNS1-211ENST00000590874 CBLN1P23435 193 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 RPL30P62888 115 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 FAM209BQ5JX69 171 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 Q6ZS49 121 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 SLC25A42Q86VD7 318 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 ZNF645Q8N7E2 425 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 CCDC140Q96MF4 163 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 ELF5Q9UKW6 265 aaPredicted RBP19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 S4R3C0 116 aa19.22■□□□□ 0.67
CAPNS1-211ENST00000590874 E7EUB6 86 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 RANBP1P43487 201 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 PSMD7P51665 324 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 ARFRP1Q13795 201 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 KCTD9Q7L273 389 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 SLC16A13Q7RTY0 426 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 GPHB5Q86YW7 130 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 OVOL2Q9BRP0 275 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 DUSP21Q9H596 190 aa19.21■□□□□ 0.67
CAPNS1-211ENST00000590874 TMEM213A2RRL7 107 aa19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 IL6RP08887 468 aaPredicted RBP19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 TALDO1P37837 337 aa19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 GABARAPL2P60520 117 aa19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 OR51E2Q9H255 320 aa19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 ACOT13Q9NPJ3 140 aa19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 MLXQ9UH92 298 aa19.2■□□□□ 0.66
CAPNS1-211ENST00000590874 A0A1B0GW64 132 aa19.19■□□□□ 0.66
CAPNS1-211ENST00000590874 NPIPB5A8MRT5 1133 aa19.19■□□□□ 0.66
CAPNS1-211ENST00000590874 NDUFB8O95169 186 aa19.19■□□□□ 0.66
CAPNS1-211ENST00000590874 IGLV2-14P01704 120 aa19.19■□□□□ 0.66
CAPNS1-211ENST00000590874 ARL3P36405 182 aa19.19■□□□□ 0.66
CAPNS1-211ENST00000590874 ZNF57Q68EA5 555 aaPredicted RBP19.19■□□□□ 0.66
CAPNS1-211ENST00000590874 CLEC19AQ6UXS0 136 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms