RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SEC22CQ9BRL7 303 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 PLEKHA2Q9HB19 425 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 SHPKQ9UHJ6 478 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 MMP24Q9Y5R2 645 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 IGHV3-72A0A0B4J1Y9 119 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 PIGBOS1A0A0B4J2F0 54 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 HPRT1P00492 218 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 IGKV1-16P04430 117 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 CBX3Q13185 183 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 ANKRD55Q3KP44 614 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 TMEM177Q53S58 311 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 OR2B11Q5JQS5 317 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 LIAT1Q6ZQX7 453 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 LRTM2Q8N967 370 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 OR52B4Q8NGK2 314 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 OR4C13Q8NGP0 309 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 IL22RA2Q969J5 263 aa13.27□□□□□ -0.29
GCDH-213ENST00000590627 A0A1B0GUS0 222 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 H7C2Y5 167 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 CREBL2O60519 120 aaPredicted RBP13.26□□□□□ -0.29
GCDH-213ENST00000590627 CRYZL1O95825 349 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 FAM106CPP0CH98 169 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 LPAR6P43657 344 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 LRRC75BQ2VPJ9 315 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 LGI3Q8N145 548 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 CMYA5Q8N3K9 4069 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 COQ8AQ8NI60 647 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 OSR1Q8TAX0 266 aaPredicted RBP13.26□□□□□ -0.29
GCDH-213ENST00000590627 PIFOQ8TCI5 191 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 CASTOR1Q8WTX7 329 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 FLYWCH2Q96CP2 140 aaKnown RBP13.26□□□□□ -0.29
GCDH-213ENST00000590627 COMMD9Q9P000 198 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 ALG5Q9Y673 324 aa13.26□□□□□ -0.29
GCDH-213ENST00000590627 MOSP00540 346 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 IGKV1D-33P01593 117 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 IGKV1-33P01594 117 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 IGKV1-39P01597 117 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 IGKV1D-39P04432 117 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 SNRNP70P08621 437 aaKnown RBP13.25□□□□□ -0.29
GCDH-213ENST00000590627 MDKP21741 143 aaPredicted RBP13.25□□□□□ -0.29
GCDH-213ENST00000590627 LGALS7P47929 136 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 POU2AF1Q16633 256 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 Q6YL49 198 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 SELENOHQ8IZQ5 122 aaKnown RBP13.25□□□□□ -0.29
GCDH-213ENST00000590627 CADM3Q8N126 398 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 Q8N6K4 173 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 OR2T10Q8NGZ9 312 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 LHFPL5Q8TAF8 219 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 RBPMSQ93062 196 aaKnown RBP13.25□□□□□ -0.29
GCDH-213ENST00000590627 EAF1Q96JC9 268 aaPredicted RBP13.25□□□□□ -0.29
GCDH-213ENST00000590627 PHB2Q99623 299 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 SSX3Q99909 188 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 AIFM2Q9BRQ8 373 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 TGP01266 2768 aa13.25□□□□□ -0.29
GCDH-213ENST00000590627 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
GCDH-213ENST00000590627 DUXBA0A1W2PPF3 345 aa13.24□□□□□ -0.29
GCDH-213ENST00000590627 HOXA3O43365 443 aaPredicted RBP13.24□□□□□ -0.29
GCDH-213ENST00000590627 S1PR2O95136 353 aa13.24□□□□□ -0.29
GCDH-213ENST00000590627 PDLIM3Q53GG5 364 aaPredicted RBP13.24□□□□□ -0.29
GCDH-213ENST00000590627 ZNF695Q8IW36 515 aa13.24□□□□□ -0.29
GCDH-213ENST00000590627 C12orf45Q8N5I9 185 aaPredicted RBP13.24□□□□□ -0.29
GCDH-213ENST00000590627 OR51J1Q9H342 316 aa13.24□□□□□ -0.29
GCDH-213ENST00000590627 PRR13Q9NZ81 148 aa13.24□□□□□ -0.29
GCDH-213ENST00000590627 DBX1A6NMT0 343 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 SRRM4A7MD48 611 aaKnown RBP13.23□□□□□ -0.29
GCDH-213ENST00000590627 ATG12O94817 140 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 HRASP01112 189 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 NQO2P16083 231 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 IER3P46695 156 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
GCDH-213ENST00000590627 DEFA6Q01524 100 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 OR8H1Q8NGG4 311 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 OR5R1Q8NH85 324 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 SEC22AQ96IW7 307 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 RITA1Q96K30 269 aa13.23□□□□□ -0.29
GCDH-213ENST00000590627 TSNAXQ99598 290 aaKnown RBP13.23□□□□□ -0.29
GCDH-213ENST00000590627 SHOXO15266 292 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 SPDEFO95238 335 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 P0C879 139 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 CD24P25063 80 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 TMEM86BQ8N661 226 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 NPBQ8NG41 125 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 TAF15Q92804 592 aaKnown RBP eCLIP13.22□□□□□ -0.29
GCDH-213ENST00000590627 R3HDM4Q96D70 268 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 RBMXL1Q96E39 390 aaKnown RBP13.22□□□□□ -0.29
GCDH-213ENST00000590627 HARBI1Q96MB7 349 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
GCDH-213ENST00000590627 VWFP04275 2813 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 A6NDX4 124 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 FAM181BA6NEQ2 426 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 MARCH11A6NNE9 402 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 H3BUX3 64 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 IGKV1-5P01602 117 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 CRYBA1P05813 215 aa13.21□□□□□ -0.29
GCDH-213ENST00000590627 IL6RP08887 468 aaPredicted RBP13.21□□□□□ -0.29
GCDH-213ENST00000590627 TMEM11P17152 192 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms