RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 SPAG16Q8N0X2 631 aa16.94■□□□□ 0.3
R3HDM4-206ENST00000590454 S100ZQ8WXG8 99 aa16.94■□□□□ 0.3
R3HDM4-206ENST00000590454 CLCC1Q96S66 551 aa16.94■□□□□ 0.3
R3HDM4-206ENST00000590454 PRRT1Q99946 306 aa16.94■□□□□ 0.3
R3HDM4-206ENST00000590454 RTBDNQ9BSG5 229 aaPredicted RBP16.94■□□□□ 0.3
R3HDM4-206ENST00000590454 METTL1Q9UBP6 276 aaKnown RBP16.94■□□□□ 0.3
R3HDM4-206ENST00000590454 OPN1MWP04001 364 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 CRYGBP07316 175 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 OPN1MW2P0DN77 364 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 OPN1MW3P0DN78 364 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 CBX3Q13185 183 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 ARSJQ5FYB0 599 aaPredicted RBP16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 OR4S2Q8NH73 311 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 BORCS5Q969J3 196 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 TSNAXQ99598 290 aaKnown RBP16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 C5orf66Q9H5L9 145 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 KIAA1456Q9P272 454 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 VSIG4Q9Y279 399 aa16.93■□□□□ 0.3
R3HDM4-206ENST00000590454 FAUP35544 74 aaKnown RBP16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 VDAC2P45880 294 aaPredicted RBP16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 LGALS7P47929 136 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 INPP1P49441 399 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 PIGPP57054 158 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 PJVKQ0ZLH3 352 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 CATR1Q13166 79 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 MRGPRG-AS1Q2M3A8 158 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 ZNF585BQ52M93 769 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 NOL4LQ96MY1 436 aaPredicted RBP16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 LINC00527Q9UJ94 153 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 SCP2D1Q9UJQ7 156 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 GPR132Q9UNW8 380 aa16.92■□□□□ 0.3
R3HDM4-206ENST00000590454 IGHV7-81A0A0B4J1V7 117 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 MPPED1O15442 326 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 PLA2G10O15496 165 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 IGHG2P01859 326 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 CTSDP07339 412 aaPredicted RBP16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 F2RP25116 425 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 KIR2DS2P43631 304 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 CCR6P51684 374 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 RND3P61587 244 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 NDPQ00604 133 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 ZNF846Q147U1 533 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 PLGLAQ15195 96 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 LIN54Q6MZP7 749 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 OSR1Q8TAX0 266 aaPredicted RBP16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 ZFAND1Q8TCF1 268 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 MRAPQ8TCY5 172 aa16.91■□□□□ 0.3
R3HDM4-206ENST00000590454 S1PR2O95136 353 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 SPDEFO95238 335 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 HLA-DRB1P01911 266 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 SAA1P0DJI8 122 aaPredicted RBP16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 CD40LGP29965 261 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 BTCP35070 178 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 SSBP2P81877 361 aaPredicted RBP16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 C10orf99Q6UWK7 81 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 SLC35E3Q7Z769 313 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 KLHDC1Q8N7A1 406 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 ADAD2Q8NCV1 583 aaKnown RBP16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 ZNF486Q96H40 463 aaPredicted RBP16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 CCDC32Q9BV29 185 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 WNT10AQ9GZT5 417 aa16.9■□□□□ 0.3
R3HDM4-206ENST00000590454 RBFOX2O43251 390 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■■■□ 24.7
R3HDM4-206ENST00000590454 RPA2P15927 270 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 LPAR6P43657 344 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 UBE2KP61086 200 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 SURF2Q15527 256 aaPredicted RBP16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 SSX9Q7RTT3 188 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 DEDD2Q8WXF8 326 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 TP53RKQ96S44 253 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 WDR12Q9GZL7 423 aaKnown RBP16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 FBXO7Q9Y3I1 522 aa16.89■□□□□ 0.29
R3HDM4-206ENST00000590454 CA2P00918 260 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 ECI1P42126 302 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 CX3CL1P78423 397 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 IFITM3Q01628 133 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 SP6Q3SY56 376 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 POC5Q8NA72 575 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 WIPF2Q8TF74 440 aaPredicted RBP16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 TMEM230Q96A57 120 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 COPZ2Q9P299 210 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 C14orf166Q9Y224 244 aaKnown RBP16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 TNCP24821 2201 aa16.88■□□□□ 0.29
R3HDM4-206ENST00000590454 ARPC1BO15143 372 aaKnown RBP16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 HPRT1P00492 218 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 IGKV1-39P01597 117 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 IGKV1D-39P04432 117 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 S100GP29377 79 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 VMA21Q3ZAQ7 101 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 PPP1R27Q86WC6 154 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 TEX45Q8NA69 505 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 RHOVQ96L33 236 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 OR51J1Q9H342 316 aa16.87■□□□□ 0.29
R3HDM4-206ENST00000590454 ATP6V0E1O15342 81 aa16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 EGR2P11161 476 aaPredicted RBP16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 GNB1P62873 340 aa16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 PUSL1Q8N0Z8 303 aaKnown RBP16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 C11orf44Q8N8P7 122 aa16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 CD300LFQ8TDQ1 290 aa16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 ZNF430Q9H8G1 570 aaPredicted RBP16.86■□□□□ 0.29
R3HDM4-206ENST00000590454 PLEKHA2Q9HB19 425 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms