RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 GYPAP02724 150 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 S100A6P06703 90 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 MRPS11P82912 194 aaKnown RBP15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 RELBQ01201 579 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 ACOT6Q3I5F7 207 aaPredicted RBP15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 FAM90A2PQ658T7 463 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 TMEM140Q9NV12 185 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 JKAMPQ9P055 326 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 ZNF292O60281 2723 aa15.82■□□□□ 0.12
PRKCSH-209ENST00000589838 hADV38S2A0JD32 116 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 IGHV3-7P01780 117 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 CD1BP29016 333 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 PSMB3P49720 205 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 AKR1D1P51857 326 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 MANBALQ9NQG1 85 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 WDR83OSQ9Y284 106 aa15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 RAI1Q7Z5J4 1906 aaPredicted RBP15.81■□□□□ 0.12
PRKCSH-209ENST00000589838 DPRXA6NFQ7 191 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 C17orf100A8MU93 164 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 IGKV1D-33P01593 117 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 IGKV1-33P01594 117 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 OR4A8P0C604 315 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 TFF3Q07654 80 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 OR10A7Q8NGE5 316 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 YPEL4Q96NS1 127 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 LRFN3Q9BTN0 628 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 SAA2-SAA4A0A096LPE2 208 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 TRAV38-1A0A0B4J264 116 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 TRGV8A0A0C4DH27 118 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 hCG_1809904A0A1W2PP81 198 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 A0A1W2PR64 198 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 A0A1W2PRV1 198 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 SAA2P0DJI9 122 aaPredicted RBP15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 VDAC2P45880 294 aaPredicted RBP15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 ADIPOQQ15848 244 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 TBR1Q16650 682 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 C1QL4Q86Z23 238 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 C1orf87Q8N0U7 546 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 Q8NA96 180 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 ZNF439Q8NDP4 499 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 NGBQ9NPG2 151 aa15.8■□□□□ 0.12
PRKCSH-209ENST00000589838 HRASP01112 189 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 RPS16P62249 146 aaKnown RBP15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 RBPJQ06330 500 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 ADAM5Q6NVV9 412 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 HEPN1Q6WQI6 88 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 SPACA3Q8IXA5 215 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 LYG1Q8N1E2 194 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 LEAP2Q969E1 77 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 LINC00312Q9Y6C7 94 aa15.79■□□□□ 0.12
PRKCSH-209ENST00000589838 CUL9Q8IWT3 2517 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 RPL35P42766 123 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 CCL8P80075 99 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 MEF2BQ02080 365 aaPredicted RBP15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 MEF2CQ06413 473 aaPredicted RBP15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 BSPH1Q075Z2 132 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 FAM216BQ8N7L0 139 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 GAL3ST2Q9H3Q3 398 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 SLC25A22Q9H936 323 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 TMEM242Q9NWH2 141 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 RPUSD1Q9UJJ7 312 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 TCF19Q9Y242 345 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 LOC400499M0QZD8 3231 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 C15orf61A6NNL5 157 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 TMPRSS3P57727 454 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 FOXC1Q12948 553 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 HNF4GQ14541 408 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 POU2AF1Q16633 256 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 DUX4L9Q6RFH8 374 aaPredicted RBP15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 VKORC1L1Q8N0U8 176 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 RHOVQ96L33 236 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 SDF2L1Q9HCN8 221 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 ENY2Q9NPA8 101 aa15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 FOXA2Q9Y261 457 aaPredicted RBP15.78■□□□□ 0.12
PRKCSH-209ENST00000589838 A0A1W2PPE3 182 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 ZNF727A8MUV8 499 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 TMEM250H0YL14 139 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 THBDP07204 575 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 NDUFB7P17568 137 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 TLE1Q04724 770 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 TCF23Q7RTU1 214 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 ASCL5Q7RTU5 278 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 RAB24Q969Q5 203 aa15.77■□□□□ 0.11
PRKCSH-209ENST00000589838 C5orf52A6NGY3 159 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 GFRA3O60609 400 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 HSPE1P61604 102 aaKnown RBP15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 SNRPEP62304 92 aaKnown RBP15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 C1orf229Q6ZS94 237 aaPredicted RBP15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 SLC25A48Q6ZT89 311 aaKnown RBP15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 ZNF383Q8NA42 475 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 KCNIP2Q9NS61 270 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 SH3BGRL2Q9UJC5 107 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 RIF1Q5UIP0 2472 aaKnown RBP15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 TRAV3A0A0B4J244 114 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 SMCO3A2RU48 225 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 K7ENP7 123 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 TMPRSS2O15393 492 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 CDC34P49427 236 aaPredicted RBP15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 RTL8BQ17RB0 113 aa15.76■□□□□ 0.11
PRKCSH-209ENST00000589838 TMEM249Q2WGJ8 235 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms