RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CNTFRP26992 372 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 ARPC4P59998 168 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 CBX3Q13185 183 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 DYRK1AQ13627 763 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 PLGLAQ15195 96 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 C5orf64Q2M2E5 130 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 ACTBL2Q562R1 376 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 TCTEX1D4Q5JR98 221 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 ZNF57Q68EA5 555 aaPredicted RBP8.17□□□□□ -1.1
SDF2-208ENST00000589788 COMMD1Q8N668 190 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 ZNF383Q8NA42 475 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 NPBQ8NG41 125 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 RITA1Q96K30 269 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 RNF5Q99942 180 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 HSPB9Q9BQS6 159 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 C7orf50Q9BRJ6 194 aaKnown RBP8.17□□□□□ -1.1
SDF2-208ENST00000589788 SDHAF2Q9NX18 166 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
SDF2-208ENST00000589788 TSSC4Q9Y5U2 329 aaPredicted RBP8.17□□□□□ -1.1
SDF2-208ENST00000589788 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 PROP1O75360 226 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 HLA-DRB1P01911 266 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 AKAIN1P0CW23 69 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 VDAC1P21796 283 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 NFYAP23511 347 aaPredicted RBP8.16□□□□□ -1.1
SDF2-208ENST00000589788 LUMP51884 338 aaPredicted RBP8.16□□□□□ -1.1
SDF2-208ENST00000589788 TAS2R46P59540 309 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 DEFA1P59665 94 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 DEFA3P59666 94 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 RPS16P62249 146 aaKnown RBP8.16□□□□□ -1.1
SDF2-208ENST00000589788 ASAH1Q13510 395 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 LIN54Q6MZP7 749 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 TEX38Q6PEX7 206 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 PDPNQ86YL7 162 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 ADTRPQ96IZ2 230 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 TSNAXQ99598 290 aaKnown RBP8.16□□□□□ -1.1
SDF2-208ENST00000589788 SLC35D1Q9NTN3 355 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 TBC1D24Q9ULP9 559 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 OR2W1Q9Y3N9 320 aa8.16□□□□□ -1.1
SDF2-208ENST00000589788 NAP1L6A6NFF2 107 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 CENPXA8MT69 81 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 RRHO14718 337 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 PLA2G10O15496 165 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 LYRM1O43325 122 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 SLC22A5O76082 557 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 NDUFA3O95167 84 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 CD3DP04234 171 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 FCER2P06734 321 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 OR5H8P0DN80 308 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 HLA-DMAP28067 261 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 HRH1P35367 487 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 FAUP35544 74 aaKnown RBP8.15□□□□□ -1.1
SDF2-208ENST00000589788 THBS3P49746 956 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 LINC00205P59089 165 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 MEF2DQ14814 521 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 RTL8BQ17RB0 113 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 RNASE10Q5GAN6 216 aaKnown RBP8.15□□□□□ -1.1
SDF2-208ENST00000589788 CXorf66Q5JRM2 361 aaPredicted RBP8.15□□□□□ -1.1
SDF2-208ENST00000589788 VAX1Q5SQQ9 334 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 STEAP1BQ6NZ63 245 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 OR5AP2Q8NGF4 316 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 OR4C16Q8NGL9 310 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 FLYWCH2Q96CP2 140 aaKnown RBP8.15□□□□□ -1.1
SDF2-208ENST00000589788 OR51J1Q9H342 316 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 FBXL15Q9H469 300 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 HRASLSQ9HDD0 168 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 PARP11Q9NR21 331 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 NECAP2Q9NVZ3 263 aa8.15□□□□□ -1.1
SDF2-208ENST00000589788 METTL1Q9UBP6 276 aaKnown RBP8.15□□□□□ -1.1
SDF2-208ENST00000589788 LINC00854A0A1B0GVQ3 168 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 SPDEFO95238 335 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 RAB3DO95716 219 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 IGKV1-16P04430 117 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 IGF1P05019 195 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 RRASP10301 218 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 FCGR2CP31995 323 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 RPL23AP62750 156 aaKnown RBP8.14□□□□□ -1.11
SDF2-208ENST00000589788 CDK10Q15131 360 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 PSG5Q15238 335 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 ZNF660Q6AZW8 331 aaPredicted RBP8.14□□□□□ -1.11
SDF2-208ENST00000589788 OVCH2Q7RTZ1 564 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 ZNF645Q8N7E2 425 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 OR5H2Q8NGV7 314 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 ABHD5Q8WTS1 349 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 CLCC1Q96S66 551 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 TINAGL1Q9GZM7 467 aaPredicted RBP8.14□□□□□ -1.11
SDF2-208ENST00000589788 ZFP57Q9NU63 452 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 WSB1Q9Y6I7 421 aa8.14□□□□□ -1.11
SDF2-208ENST00000589788 IGHV7-81A0A0B4J1V7 117 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 M0QYG6 137 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 SLC25A17O43808 307 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 TUSC2O75896 110 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 PMP2P02689 132 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 BTCP35070 178 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 LGALS7P47929 136 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 RFX2P48378 723 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 FOXE3Q13461 319 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 RGS21Q2M5E4 152 aa8.13□□□□□ -1.11
SDF2-208ENST00000589788 FAAP20Q6NZ36 180 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms