RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PIGP	P57054	158 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	TESK1	Q15569	626 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	SNX22	Q96L94	193 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	SLC2A9	Q9NRM0	540 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR1A1	Q9P1Q5	309 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	TRAV1-1	A0A0B4J248	108 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318		A0A1B0GU03	582 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	TNFRSF1A	P19438	455 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	GNRHR	P30968	328 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	C1orf194	Q5T5A4	169 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	STUM	Q69YW2	141 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	BTNL3	Q6UXE8	466 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	SLC35G3	Q8N808	338 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR11L1	Q8NGX0	322 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR2G3	Q8NGZ4	309 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	UBALD1	Q8TB05	177 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	TMEM208	Q9BTX3	173 aa		12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	CISD1	Q9NZ45	108 aa	Known RBP	12.8	□□□□□ -0.36
DDX39A-209	ENST00000589318	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	PITX3	O75364	302 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	C1QL1	O75973	258 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	DIRAS3	O95661	229 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	SCGB1D2	O95969	90 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	GABRA2	P47869	451 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	COTL1	Q14019	142 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	GNMT	Q14749	295 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	ZNF672	Q499Z4	452 aa	Predicted RBP	12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	PHLDA2	Q53GA4	152 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	TPRX1	Q8N7U7	411 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	CYB561D1	Q8N8Q1	229 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	IL1F10	Q8WWZ1	152 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	BSCL2	Q96G97	398 aa	Predicted RBP	12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	SH3BGRL3	Q9H299	93 aa		12.79	□□□□□ -0.36
DDX39A-209	ENST00000589318	LRBA	P50851	2863 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318		B9A039	149 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	C12orf77	C9JDV5	145 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	CLDN14	O95500	239 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	TEX36	Q5VZQ5	186 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	PRR18	Q8N4B5	295 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	ZNRF1	Q8ND25	227 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	ABHD14B	Q96IU4	210 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	PYGO2	Q9BRQ0	406 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	NAA60	Q9H7X0	242 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	SAP30L	Q9HAJ7	183 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	KIR2DL5B	A0A0G2JN68	375 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	KIR2DL5B	A0A0G2JPC4	375 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	ABCA11P	Q4W5N1	156 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	ZNF818P	Q6ZRF7	136 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	KIR2DL5A	Q8N109	375 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR13A1	Q8NGR1	328 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR4X1	Q8NH49	305 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR1L1	Q8NH94	360 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	CLDND2	Q8NHS1	167 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	SDSL	Q96GA7	329 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	ATG101	Q9BSB4	218 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	OR2W1	Q9Y3N9	320 aa		12.78	□□□□□ -0.36
DDX39A-209	ENST00000589318	OOEP	A6NGQ2	149 aa		12.77	□□□□□ -0.37
DDX39A-209	ENST00000589318	MRGPRD	Q8TDS7	321 aa		12.77	□□□□□ -0.37
DDX39A-209	ENST00000589318	P2RX4	Q99571	388 aa		12.77	□□□□□ -0.37
DDX39A-209	ENST00000589318	DCTN5	Q9BTE1	182 aa		12.77	□□□□□ -0.37
DDX39A-209	ENST00000589318	MS4A5	Q9H3V2	200 aa		12.77	□□□□□ -0.37
DDX39A-209	ENST00000589318	DYNLRB1	Q9NP97	96 aa		12.77	□□□□□ -0.37
DDX39A-209	ENST00000589318	MGST3	O14880	152 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	RPL23A	P62750	156 aa	Known RBP	12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	TMEM187	Q14656	261 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	SAPCD1	Q5SSQ6	148 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	GAFA1	Q96PS6	74 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	CCL28	Q9NRJ3	127 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	LOC102723971	A0A1B0GUV8	181 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	HBZ	P02008	142 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	IRF2	P14316	349 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	ATP6V0C	P27449	155 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	CCL20	P78556	96 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.76	□□□□□ -0.37	8e-7	■□□□□ 11.3
DDX39A-209	ENST00000589318	EDDM3A	Q14507	147 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	C21orf62-AS1	Q17RA5	79 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	SP6	Q3SY56	376 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	CYB5R2	Q6BCY4	276 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	ZNF788	Q6ZQV5	615 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	LGI3	Q8N145	548 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	MUC15	Q8N387	334 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	DEFB108B	Q8NET1	73 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	KCNIP1	Q9NZI2	227 aa		12.76	□□□□□ -0.37
DDX39A-209	ENST00000589318	DCHS2	Q6V1P9	2916 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	ODAM	A1E959	279 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	XKRY2	A2RUG3	117 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	C15orf65	H3BRN8	121 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	TMEM178B	H3BS89	294 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	MPPED1	O15442	326 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	IGLV2-14	P01704	120 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	GYPA	P02724	150 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	SSTR5	P35346	364 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	FAM3B	P58499	235 aa	Predicted RBP	12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	CR1L	Q2VPA4	569 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms