RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 IGHV3-15A0A0B4J1V0 119 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 C5orf49A4QMS7 147 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 OR5K4A6NMS3 321 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 UBE2L6O14933 153 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 SSNA1O43805 119 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 NDUFB2O95178 105 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 MT-CO2P00403 227 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 CDC34P49427 236 aaPredicted RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 ZNF140P52738 457 aaPredicted RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM33P57088 247 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 CXCR4P61073 352 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 HLA-DRB3P79483 266 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM31Q5JXX7 168 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 N4BP2L1Q5TBK1 243 aaPredicted RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 C1orf174Q8IYL3 243 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 LRRC34Q8IZ02 419 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 RNASE11Q8TAA1 199 aaKnown RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 CMTM5Q96DZ9 223 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 Q9BRP9 147 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 LLPHQ9BRT6 129 aaKnown RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 ZNF471Q9BX82 626 aaPredicted RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 PECRQ9BY49 303 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 TTTY12Q9BZ98 90 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 NKIRAS1Q9NYS0 192 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 ATP6V1DQ9Y5K8 247 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 HERC2O95714 4834 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 PRRC2CQ9Y520 2896 aaKnown RBP1.38□□□□□ -2.19
SMAD4-207ENST00000589076 PLCH2O75038 1416 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
SMAD4-207ENST00000589076 ADGRB3O60242 1522 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 C2orf74A8MZ97 194 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 GNRH2O43555 120 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 IGHV1-69P01742 117 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 APOEP02649 317 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 OCM2P0CE71 109 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 C8orf88P0DMB2 117 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 IFI30P13284 250 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 DDTP30046 118 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 XCL1P47992 114 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 SERPINB10P48595 397 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 EMP2P54851 167 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 HOXC5Q00444 222 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 COTL1Q14019 142 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 SLC36A2Q495M3 483 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 TNFAIP8L2Q6P589 184 aaPredicted RBP1.37□□□□□ -2.19
SMAD4-207ENST00000589076 FAM151BQ6UXP7 276 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 GLT6D1Q7Z4J2 308 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 SLC35F6Q8N357 371 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 OTUD6BQ8N6M0 293 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 ZNF283Q8N7M2 679 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 CNEP1R1Q8N9A8 125 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 MRPS24Q96EL2 167 aaKnown RBP1.37□□□□□ -2.19
SMAD4-207ENST00000589076 ANKRD36BP1Q96IX9 119 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 DERL2Q9GZP9 239 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 HES4Q9HCC6 221 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 SLC2A9Q9NRM0 540 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 C15orf41Q9Y2V0 281 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 KLK5Q9Y337 293 aaPredicted RBP1.37□□□□□ -2.19
SMAD4-207ENST00000589076 PTPRBP23467 1997 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 COL12A1Q99715 3063 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 TENM3Q9P273 2699 aa1.37□□□□□ -2.19
SMAD4-207ENST00000589076 ABCC11Q96J66 1382 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 LAMA3Q16787 3333 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 ASPMQ8IZT6 3477 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 C11orf86A6NJI1 115 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 H3BRN7 92 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 OVOL1O14753 267 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 IGKV1-16P04430 117 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 COX5BP10606 129 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 UAP1Q16222 522 aaPredicted RBP1.36□□□□□ -2.19
SMAD4-207ENST00000589076 PLPPR5Q32ZL2 321 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 CST9Q5W186 159 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 AGTRAPQ6RW13 159 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 NAA40Q86UY6 237 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 OR4X1Q8NH49 305 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 CLDND2Q8NHS1 167 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 RPS4Y2Q8TD47 263 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 EEF1AKMT1Q8WVE0 214 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 FGF13Q92913 245 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 NDUFB11Q9NX14 153 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 POLR1DQ9Y2S0 133 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 FAM215AQ9Y5M1 114 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 SORL1Q92673 2214 aa1.36□□□□□ -2.19
SMAD4-207ENST00000589076 OR6C6A6NF89 314 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 PFDN6O15212 129 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 NPYP01303 97 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 HLA-DRAP01903 254 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 UCHL1P09936 223 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 ALOX5APP20292 161 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 CD24P25063 80 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 MAGEA2P43356 314 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 RPL27AP46776 148 aaKnown RBP1.35□□□□□ -2.19
SMAD4-207ENST00000589076 HINT1P49773 126 aaPredicted RBP1.35□□□□□ -2.19
SMAD4-207ENST00000589076 CDK9P50750 372 aaKnown RBP1.35□□□□□ -2.19
SMAD4-207ENST00000589076 RBM11P57052 281 aaKnown RBP1.35□□□□□ -2.19
SMAD4-207ENST00000589076 TAS2R30P59541 319 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 TBPL1P62380 186 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 GNA12Q03113 381 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 MLLT11Q13015 90 aaPredicted RBP1.35□□□□□ -2.19
SMAD4-207ENST00000589076 LGALS9BQ3B8N2 356 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms