RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 FLYWCH2Q96CP2 140 aaKnown RBP18■□□□□ 0.47
ATG4D-209ENST00000588857 AIFM2Q9BRQ8 373 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 CACNG5Q9UF02 275 aa18■□□□□ 0.47
ATG4D-209ENST00000588857 MPC2O95563 127 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 PET100P0DJ07 73 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 IGHV4-31P0DP07 118 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 RAB32Q13637 225 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 MIDNQ504T8 468 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 CCDC144NLQ6NUI1 221 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 OR8H3Q8N146 312 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 OR4C13Q8NGP0 309 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 OSR1Q8TAX0 266 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-209ENST00000588857 THAP6Q8TBB0 222 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 ZFP57Q9NU63 452 aa17.99■□□□□ 0.47
ATG4D-209ENST00000588857 TRAV14DV4A0A0A6YYC5 116 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 CENPVL3A0A0U1RRI6 287 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 OOSP1A8MZH6 123 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 SHOXO15266 292 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 P0C879 139 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 SSX9Q7RTT3 188 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 FOXRED2Q8IWF2 684 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 OR11H4Q8NGC9 324 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 OR4D5Q8NGN0 318 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 RHOVQ96L33 236 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 ACANP16112 2415 aa17.98■□□□□ 0.47
ATG4D-209ENST00000588857 FXYD6-FXYD2A0A087WZ82 144 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 IGHV3-72A0A0B4J1Y9 119 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 A0A1W2PPI3 338 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 J3QLI3 93 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 NPFFO15130 113 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 NKX2-1P43699 371 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-209ENST00000588857 SSX2Q16385 188 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 TMEM177Q53S58 311 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 C11orf87Q6NUJ2 197 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 Q6ZRM9 215 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 VKORC1L1Q8N0U8 176 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 MTORP42345 2549 aa17.97■□□□□ 0.47
ATG4D-209ENST00000588857 ST8SIA3O43173 380 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 MBPP02686 304 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-209ENST00000588857 RLN2P04090 185 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 SAA4P35542 130 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 RPS16P62249 146 aaKnown RBP17.96■□□□□ 0.47
ATG4D-209ENST00000588857 GPR157Q5UAW9 335 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 MALSU1Q96EH3 234 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 HARBI1Q96MB7 349 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 COA4Q9NYJ1 87 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 LSM5Q9Y4Y9 91 aaKnown RBP17.96■□□□□ 0.47
ATG4D-209ENST00000588857 ZANQ9Y493 2812 aa17.96■□□□□ 0.47
ATG4D-209ENST00000588857 TRAV40A0A0B4J280 105 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 IGHV1-69DA0A0B4J2H0 117 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 FAM90A9PA6NNJ1 464 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 TIMM23O14925 209 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 PITX3O75364 302 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 IGHV1-69P01742 117 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 ARHGDIBP52566 201 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 RBMXL1Q96E39 390 aaKnown RBP17.96■□□□□ 0.46
ATG4D-209ENST00000588857 MS4A7Q9GZW8 240 aaPredicted RBP17.96■□□□□ 0.46
ATG4D-209ENST00000588857 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.96■□□□□ 0.46
ATG4D-209ENST00000588857 TMEM140Q9NV12 185 aa17.96■□□□□ 0.46
ATG4D-209ENST00000588857 RBMXL2O75526 392 aaKnown RBP17.95■□□□□ 0.46
ATG4D-209ENST00000588857 SLC25A4P12235 298 aa17.95■□□□□ 0.46
ATG4D-209ENST00000588857 POU2AF1Q16633 256 aa17.95■□□□□ 0.46
ATG4D-209ENST00000588857 CXorf66Q5JRM2 361 aaPredicted RBP17.95■□□□□ 0.46
ATG4D-209ENST00000588857 CYB5R2Q6BCY4 276 aa17.95■□□□□ 0.46
ATG4D-209ENST00000588857 GRPEL2Q8TAA5 225 aa17.95■□□□□ 0.46
ATG4D-209ENST00000588857 MBD2Q9UBB5 411 aa17.95■□□□□ 0.46
ATG4D-209ENST00000588857 POMT1Q9Y6A1 747 aa17.95■□□□□ 0.46
ATG4D-209ENST00000588857 K7EPK0 472 aa17.94■□□□□ 0.46
ATG4D-209ENST00000588857 OR4A47Q6IF82 309 aa17.94■□□□□ 0.46
ATG4D-209ENST00000588857 PRSS54Q6PEW0 395 aa17.94■□□□□ 0.46
ATG4D-209ENST00000588857 FAM71E2Q8N5Q1 922 aa17.94■□□□□ 0.46
ATG4D-209ENST00000588857 OR4A16Q8NH70 328 aa17.94■□□□□ 0.46
ATG4D-209ENST00000588857 FLNAP21333 2647 aaKnown RBP17.94■□□□□ 0.46
ATG4D-209ENST00000588857 IGHV3OR16-10A0A075B7F0 116 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 NXPH3O95157 252 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 CD1BP29016 333 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 LGALS7P47929 136 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 ZNF546Q86UE3 836 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 PIP4P2Q8N4L2 257 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 C17orf50Q8WW18 174 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 RNF126Q9BV68 326 aa17.93■□□□□ 0.46
ATG4D-209ENST00000588857 SRRM4A7MD48 611 aaKnown RBP17.92■□□□□ 0.46
ATG4D-209ENST00000588857 HMSDA8MTL9 139 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 WRBO00258 174 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 DEDDO75618 318 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 SNAPC5O75971 98 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 OR9G9P0C7N8 305 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 ID3Q02535 119 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 DYNAPQ8N1N2 210 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 CIARTQ8N365 385 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-209ENST00000588857 DCUN1D4Q92564 292 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 MAGT1Q9H0U3 335 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 OR5AC2Q9NZP5 309 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 ABCA1O95477 2261 aa17.92■□□□□ 0.46
ATG4D-209ENST00000588857 H0YIZ8 118 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 ARPC5O15511 151 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 PAX6P26367 422 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 HABP2Q14520 560 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-209ENST00000588857 RUSC1-AS1Q66K80 236 aa17.91■□□□□ 0.46
ATG4D-209ENST00000588857 TMEM65Q6PI78 240 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms