RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 RAB3CQ96E17 227 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 WDR89Q96FK6 387 aaPredicted RBP13.83□□□□□ -0.2
CCDC43-204ENST00000588687 ADTRPQ96IZ2 230 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 TEX22C9J3V5 150 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 RAB27BO00194 218 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 ARL6IP5O75915 188 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 HLA-AP01891 365 aaKnown RBP13.82□□□□□ -0.2
CCDC43-204ENST00000588687 FOLR2P14207 255 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 CALRP27797 417 aaKnown RBP13.82□□□□□ -0.2
CCDC43-204ENST00000588687 FABP5Q01469 135 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 CDK10Q15131 360 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 C15orf32Q32M92 178 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 Q6ZS49 121 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
CCDC43-204ENST00000588687 CCDC140Q96MF4 163 aa13.82□□□□□ -0.2
CCDC43-204ENST00000588687 A0A1B0GW64 132 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 LGALS9O00182 355 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 MPPED1O15442 326 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 TUSC2O75896 110 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 OR2J3O76001 311 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 HIST1H1DP16402 221 aaKnown RBP13.81□□□□□ -0.2
CCDC43-204ENST00000588687 GNB3P16520 340 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 CACNG8Q8WXS5 425 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 SPIN2AQ99865 258 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 SPIN2BQ9BPZ2 258 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 RAB22AQ9UL26 194 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 V9GY05 133 aa13.81□□□□□ -0.2
CCDC43-204ENST00000588687 TMEM213A2RRL7 107 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 IGLV2-14P01704 120 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 PSMA1P25786 263 aaKnown RBP13.8□□□□□ -0.2
CCDC43-204ENST00000588687 MLLT11Q13015 90 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-204ENST00000588687 TRAM1Q15629 374 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 HES5Q5TA89 166 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 TMEM61Q8N0U2 210 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 OR10R2Q8NGX6 335 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 KRTAP17-1Q9BYP8 105 aa13.8□□□□□ -0.2
CCDC43-204ENST00000588687 TECRQ9NZ01 308 aaKnown RBP13.8□□□□□ -0.2
CCDC43-204ENST00000588687 VPS13DQ5THJ4 4388 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 A8MWP6 167 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 E7EUB6 86 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 OR10A3P58181 314 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 RPL30P62888 115 aaKnown RBP13.79□□□□□ -0.2
CCDC43-204ENST00000588687 MRPS15P82914 257 aaKnown RBP13.79□□□□□ -0.2
CCDC43-204ENST00000588687 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 KLK9Q2XQG4 91 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 MMD2Q8IY49 270 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 FANCD2OSQ96PS1 177 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 GINS4Q9BRT9 223 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 DUSP21Q9H596 190 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 MLXQ9UH92 298 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 KLK9Q9UKQ9 250 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 ELF5Q9UKW6 265 aaPredicted RBP13.79□□□□□ -0.2
CCDC43-204ENST00000588687 ZNF257Q9Y2Q1 563 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 SELENOKQ9Y6D0 94 aa13.79□□□□□ -0.2
CCDC43-204ENST00000588687 HMX3A6NHT5 357 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 NPIPB5A8MRT5 1133 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 EBAG9O00559 213 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 CREBL2O60519 120 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-204ENST00000588687 GGCTO75223 188 aaKnown RBP13.78□□□□□ -0.2
CCDC43-204ENST00000588687 OR2C1O95371 312 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 IL6RP08887 468 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-204ENST00000588687 HSMCR30P0CW71 290 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 CBLN1P23435 193 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 EIF4EBP1Q13541 118 aaPredicted RBP13.78□□□□□ -0.2
CCDC43-204ENST00000588687 FAM209BQ5JX69 171 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 GPHB5Q86YW7 130 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 VKORC1L1Q8N0U8 176 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 ZNF645Q8N7E2 425 aa13.78□□□□□ -0.2
CCDC43-204ENST00000588687 RBM7Q9Y580 266 aaKnown RBP13.78□□□□□ -0.2
CCDC43-204ENST00000588687 RAB6AP20340 208 aa13.77□□□□□ -0.21
CCDC43-204ENST00000588687 BRWD1-AS2P59051 145 aa13.77□□□□□ -0.21
CCDC43-204ENST00000588687 KCTD9Q7L273 389 aa13.77□□□□□ -0.21
CCDC43-204ENST00000588687 A0A075B6Q4 140 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 IFITM5A6NNB3 132 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 FCGR3BO75015 233 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 ACTL6BO94805 426 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 ZNF735P0CB33 412 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 EWSR1Q01844 656 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC43-204ENST00000588687 SLC25A42Q86VD7 318 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 NR2C2APQ86WQ0 139 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 PUSL1Q8N0Z8 303 aaKnown RBP13.76□□□□□ -0.21
CCDC43-204ENST00000588687 GGTLC1Q9BX51 225 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 FBXL7Q9UJT9 491 aa13.76□□□□□ -0.21
CCDC43-204ENST00000588687 KBTBD11O94819 623 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 NDUFB8O95169 186 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 HLA-DQB1P01920 261 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 CRYGCP07315 174 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 AREGP15514 252 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 DTYMKP23919 212 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 GADD45AP24522 165 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 SSX1Q16384 188 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 OR2B11Q5JQS5 317 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 SLC16A13Q7RTY0 426 aa13.75□□□□□ -0.21
CCDC43-204ENST00000588687 TMEM167AQ8TBQ9 72 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms