RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 UCP1P25874 307 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 CATR1Q13166 79 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 LYG1Q8N1E2 194 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 ABHD14BQ96IU4 210 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 HYLS1Q96M11 299 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 TMEM56Q96MV1 263 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 GPHA2Q96T91 129 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 TMEM56-RWDD3S4R434 201 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 TMEM89A2RUT3 159 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 HOXB5P09067 269 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 CYCSP99999 105 aaKnown RBP16.16■□□□□ 0.18
ATG4D-208ENST00000588667 DHRS7BQ6IAN0 325 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-208ENST00000588667 ZNF66Q6ZN08 573 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 HSD17B10Q99714 261 aaKnown RBP16.16■□□□□ 0.18
ATG4D-208ENST00000588667 IFI27L2Q9H2X8 130 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 SDHAF2Q9NX18 166 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 GAB2Q9UQC2 676 aa16.16■□□□□ 0.18
ATG4D-208ENST00000588667 A6NDX4 124 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 TIMM23O14925 209 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 TXNL1O43396 289 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 CDS2O95674 445 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 SERPINE2P07093 398 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 TMEM268Q5VZI3 342 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 ZNF695Q8IW36 515 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-208ENST00000588667 IL22RA2Q969J5 263 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 SEC22AQ96IW7 307 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 C1RLQ9NZP8 487 aa16.15■□□□□ 0.18
ATG4D-208ENST00000588667 IGHV1-3A0A0C4DH29 117 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 DUXBA0A1W2PPF3 345 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 REG1BP48304 166 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 ODF3L1Q8IXM7 274 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 CFHR4Q92496 578 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 NMES1Q9C002 83 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 COMMD9Q9P000 198 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 TMED3Q9Y3Q3 217 aa16.14■□□□□ 0.17
ATG4D-208ENST00000588667 RAB29O14966 203 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 CHST1O43916 411 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 NDUFA7O95182 113 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 NKX2-5P52952 324 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-208ENST00000588667 FGL1Q08830 312 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 EIF4EBP1Q13541 118 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-208ENST00000588667 HABP2Q14520 560 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-208ENST00000588667 GGNBP1Q5YKI7 109 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 TGIF2LXQ8IUE1 241 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 TCTEX1D1Q8N7M0 179 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 RBPMSQ93062 196 aaKnown RBP16.13■□□□□ 0.17
ATG4D-208ENST00000588667 C5orf30Q96GV9 206 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 C2orf50Q96LR7 162 aa16.13■□□□□ 0.17
ATG4D-208ENST00000588667 FAM90A9PA6NNJ1 464 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 CD24P25063 80 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 COMPP49747 757 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-208ENST00000588667 RELBQ01201 579 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 FOXL1Q12952 345 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 LYZL2Q7Z4W2 148 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 TMEM219Q86XT9 240 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 SLC35G3Q8N808 338 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 LHFPL5Q8TAF8 219 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 TAF15Q92804 592 aaKnown RBP eCLIP16.12■□□□□ 0.17
ATG4D-208ENST00000588667 WDR89Q96FK6 387 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-208ENST00000588667 SAA2-SAA4A0A096LPE2 208 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 FAM106CPP0CH98 169 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 SAA2P0DJI9 122 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-208ENST00000588667 FAM71F2Q6NXP2 309 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 ZNF833PQ6ZTB9 187 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 MOB3BQ86TA1 216 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 THNSL2Q86YJ6 484 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 SELENOHQ8IZQ5 122 aaKnown RBP16.12■□□□□ 0.17
ATG4D-208ENST00000588667 TCTEX1D2Q8WW35 142 aa16.12■□□□□ 0.17
ATG4D-208ENST00000588667 FAM212BQ9NTI7 297 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-208ENST00000588667 TENM1Q9UKZ4 2725 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 G3V3Q6 166 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 RPA2P15927 270 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 IAH1Q2TAA2 248 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-208ENST00000588667 Q5BKY6 102 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 C16orf82Q7Z2V1 217 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 OR4F5Q8NH21 305 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 OR10C1Q96KK4 312 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 NPFFR1Q9GZQ6 430 aa16.11■□□□□ 0.17
ATG4D-208ENST00000588667 MPTX1A8MV57 137 aa16.1■□□□□ 0.17
ATG4D-208ENST00000588667 M0R1X1 148 aa16.1■□□□□ 0.17
ATG4D-208ENST00000588667 SNRNP70P08621 437 aaKnown RBP16.1■□□□□ 0.17
ATG4D-208ENST00000588667 VDAC1P21796 283 aa16.1■□□□□ 0.17
ATG4D-208ENST00000588667 PPP1R1CQ8WVI7 109 aa16.1■□□□□ 0.17
ATG4D-208ENST00000588667 S1PR3Q99500 378 aa16.1■□□□□ 0.17
ATG4D-208ENST00000588667 OR2F2O95006 317 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 DUTP33316 252 aaKnown RBP16.09■□□□□ 0.17
ATG4D-208ENST00000588667 RPL30P62888 115 aaKnown RBP16.09■□□□□ 0.17
ATG4D-208ENST00000588667 FBLN7Q53RD9 439 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 AWAT1Q58HT5 328 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 RPL39P5Q59GN2 51 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 Q6ZSV7 163 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 OR11H4Q8NGC9 324 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 SPATA3Q8NHX4 192 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 CD300LFQ8TDQ1 290 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 SPIN2AQ99865 258 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 SPIN2BQ9BPZ2 258 aa16.09■□□□□ 0.17
ATG4D-208ENST00000588667 A0A1B0GUS0 222 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 PROP1O75360 226 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 TSPAN9O75954 239 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms