RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TMPRSS5Q9H3S3 457 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 MBNL3Q9NUK0 354 aaKnown RBP10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 TMEM106BQ9NUM4 274 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 FRYQ5TBA9 3013 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 K7ENP7 123 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 CNIH1O95406 144 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 Q6ZS49 121 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 MUC15Q8N387 334 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 TIMD4Q96H15 378 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 VSIRQ9H7M9 311 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 DOK5Q9P104 306 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 RPH3ALQ9UNE2 315 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 hCG_1809904A0A1W2PP81 198 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 A0A1W2PR64 198 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 A0A1W2PRV1 198 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF737O75373 536 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 MYOD1P15172 320 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 ADIPOQQ15848 244 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 ACOT6Q3I5F7 207 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 ELOVL5Q9NYP7 299 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 RNF115Q9Y4L5 304 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 TRBV6-6A0A0A6YYG2 114 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 OR9G9P0C7N8 305 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 UCNP55089 124 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF561Q8N587 486 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 TRAV3A0A0B4J244 114 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 KBTBD11-OT1A0A1B0GTJ5 212 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 C9JQL5 133 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 J3QR06 171 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 CHRNB4P30926 498 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 CEACAM8P31997 349 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 TFF3Q07654 80 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 DAZAP2Q15038 168 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 TGIF2LXQ8IUE1 241 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 COMMD1Q8N668 190 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 OR5B12Q96R08 314 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 LPAR2Q9HBW0 351 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 TCF19Q9Y242 345 aa10.34□□□□□ -0.75
SMARCA4-208ENST00000585799 SAA2-SAA4A0A096LPE2 208 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 OR7C2O60412 319 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 SAA2P0DJI9 122 aaPredicted RBP10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 LYL1P12980 280 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 MST1LQ2TV78 715 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 C4orf17Q53FE4 359 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 IGHV1-69-2A0A0G2JMI3 117 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 MMP9P14780 707 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 NPY1RP25929 384 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 IL3RAP26951 378 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 DUTP33316 252 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 THBS3P49746 956 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 SRSF7Q16629 238 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 CDC34P49427 236 aaPredicted RBP10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 KLRB1Q12918 225 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 ZNF525Q8N782 197 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 RNASE6Q93091 150 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
SMARCA4-208ENST00000585799 PLXNB1O43157 2135 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 DVL1O14640 695 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 GRNP28799 593 aaKnown RBP10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 ERHP84090 104 aaKnown RBP10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 NHLH1Q02575 133 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 MIC13Q5XKP0 118 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 SIRT7Q9NRC8 400 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 H3BQ15 152 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 PAGE4O60829 102 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 OR5G3P0C626 314 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 CD1BP29016 333 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 LYPD2Q6UXB3 125 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 RPEQ96AT9 228 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 BARX1Q9HBU1 254 aaPredicted RBP10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 BIN3Q9NQY0 253 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 CSPG4Q6UVK1 2322 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 BTBD17A6NE02 478 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 LGALS4P56470 323 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 PDZD11Q5EBL8 140 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 CT45A1Q5HYN5 189 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 OR10A7Q8NGE5 316 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 CT45A3Q8NHU0 189 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 FLYWCH2Q96CP2 140 aaKnown RBP10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 AUP1Q9Y679 476 aa10.32□□□□□ -0.76
SMARCA4-208ENST00000585799 MMP23AO75900 390 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 MT-CO2P00403 227 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 CRYBA1P05813 215 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 MDKP21741 143 aaPredicted RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 S100PP25815 95 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 TVP23CQ96ET8 276 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 RCC1LQ96I51 464 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 SLC35E1Q96K37 410 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 SSUH2Q9Y2M2 353 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 REG1AP05451 166 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 OPRK1P41145 380 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 PAX9P55771 341 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 ARF6P62330 175 aa10.31□□□□□ -0.76
SMARCA4-208ENST00000585799 ZNF880Q6PDB4 577 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms