RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 FAM213BQ8TBF2 198 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 DTD1Q8TEA8 209 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 PINX1Q96BK5 328 aaKnown RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 ZNF714Q96N38 554 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 DCAF16Q9NXF7 216 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 TIMM9Q9Y5J7 89 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 SAA2-SAA4A0A096LPE2 208 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 TRBV23-1A0A0A0MS06 115 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 MEX3AA1L020 520 aaKnown RBP9.27□□□□□ -0.93
LIG3-204ENST00000585740 SLC31A2O15432 143 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 PPIHO43447 177 aaKnown RBP9.27□□□□□ -0.93
LIG3-204ENST00000585740 PROP1O75360 226 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 SCO1O75880 301 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 HRASP01112 189 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 SAA2P0DJI9 122 aaPredicted RBP9.27□□□□□ -0.93
LIG3-204ENST00000585740 SERF2P84101 59 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 DEFA5Q01523 94 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 LRRC75BQ2VPJ9 315 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 PDLIM3Q53GG5 364 aaPredicted RBP9.27□□□□□ -0.93
LIG3-204ENST00000585740 RPL39P5Q59GN2 51 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 PUSL1Q8N0Z8 303 aaKnown RBP9.27□□□□□ -0.93
LIG3-204ENST00000585740 LYG1Q8N1E2 194 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 ZCCHC24Q8N2G6 241 aaKnown RBP9.27□□□□□ -0.93
LIG3-204ENST00000585740 MUC15Q8N387 334 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 NEUROG1Q92886 237 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 TMEM204Q9BSN7 226 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 KPTNQ9Y664 436 aa9.27□□□□□ -0.93
LIG3-204ENST00000585740 GPR37O15354 613 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 SNAPINO95295 136 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 H2AFB1P0C5Y9 115 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 OR9G9P0C7N8 305 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 GNB2P62879 340 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 GUK1Q16774 197 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 RTL8BQ17RB0 113 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 ZNF429Q86V71 674 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 THNSL2Q86YJ6 484 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 LINC00311Q8N616 119 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 OR10P1Q8NGE3 313 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 RBMXL1Q96E39 390 aaKnown RBP9.26□□□□□ -0.93
LIG3-204ENST00000585740 ZNF251Q9BRH9 671 aa9.26□□□□□ -0.93
LIG3-204ENST00000585740 NKX6-2Q9C056 277 aaPredicted RBP9.26□□□□□ -0.93
LIG3-204ENST00000585740 WDR61Q9GZS3 305 aaKnown RBP9.26□□□□□ -0.93
LIG3-204ENST00000585740 SPTBN1Q01082 2364 aaKnown RBP9.26□□□□□ -0.93
LIG3-204ENST00000585740 DOCK11Q5JSL3 2073 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 SOX15O60248 233 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 PLAUP00749 431 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 IFNA17P01571 189 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 APOA2P02652 100 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 GNG10P50151 68 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 AKR1C1Q04828 323 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 ARL16Q0P5N6 197 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 ZNF273Q14593 569 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 TMEM200BQ69YZ2 307 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 ZNF833PQ6ZTB9 187 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 CENPVQ7Z7K6 275 aaPredicted RBP9.25□□□□□ -0.93
LIG3-204ENST00000585740 HAPLN4Q86UW8 402 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 ZNF596Q8TC21 504 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 H1FXQ92522 213 aaKnown RBP9.25□□□□□ -0.93
LIG3-204ENST00000585740 TAF15Q92804 592 aaKnown RBP eCLIP9.25□□□□□ -0.93
LIG3-204ENST00000585740 LEAP2Q969E1 77 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 OR4C12Q96R67 309 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 QTRT1Q9BXR0 403 aaKnown RBP9.25□□□□□ -0.93
LIG3-204ENST00000585740 RAB1BQ9H0U4 201 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 SLC35D1Q9NTN3 355 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
LIG3-204ENST00000585740 TRAV1-1A0A0B4J248 108 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 A0A1W2PPH5 198 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 C15orf61A6NNL5 157 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 PMS2P5A8MQ11 134 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 DVL1O14640 695 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 AGPAT2O15120 278 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 IGHV3-7P01780 117 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 MBP02144 154 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 SFTA3P0C7M3 94 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 IL3RAP26951 378 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 LOXP28300 417 aaPredicted RBP9.24□□□□□ -0.93
LIG3-204ENST00000585740 SRSF3P84103 164 aaKnown RBP9.24□□□□□ -0.93
LIG3-204ENST00000585740 RUNX1Q01196 453 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 RELBQ01201 579 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 BTN1A1Q13410 526 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 OR8G2PQ6IF36 304 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 ZNF383Q8NA42 475 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 TMEM186Q96B77 213 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 GGACTQ9BVM4 153 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 TMEM231Q9H6L2 316 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 ENY2Q9NPA8 101 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 KIAA1456Q9P272 454 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 PRNDQ9UKY0 176 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 FOXA2Q9Y261 457 aaPredicted RBP9.24□□□□□ -0.93
LIG3-204ENST00000585740 FAM96BQ9Y3D0 163 aa9.24□□□□□ -0.93
LIG3-204ENST00000585740 ABCA12Q86UK0 2595 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 A0A087X0M5 115 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 UBE2L5PA0A1B0GUS4 154 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 A0A1B0GX30 115 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 A0A1W2PPE3 182 aa9.23□□□□□ -0.93
LIG3-204ENST00000585740 C17orf112F2Z3M2 114 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms